Microbacterium rhizosphaerae: SM116_07025
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Entry
SM116_07025 CDS
T09585
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
mrg
Microbacterium rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mrg03016
]
SM116_07025 (miaB)
Enzymes [BR:
mrg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
SM116_07025 (miaB)
Transfer RNA biogenesis [BR:
mrg03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
SM116_07025 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
WPR91039
LinkDB
All DBs
Position
1616789..1618333
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AA seq
514 aa
AA seq
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MTTPSPAPTIIAPSPAALAPDGRARTYEVRTFGCQMNVHDSERLSGSLESAGYVPVEAGG
EADIIVINTCAVRDNAAGKLYGTLGHLKSRKEHHAGMQIAVGGCLAQMDKQTVLDKAPWV
DVVFGTHNMGSLPRLLERARHNEEAELEILESLEVFPSTLPTKRDSVHSGWVSISVGCNN
TCTFCIVPSLRGKEKDRRPGDILSEIGLLVEDGAIEVTLLGQNVNSYGVEFGDRQAFGKL
LRAAGQIEGLERIRFTSPHPAAFTDDVIDAMAETPAVMPQLHMPLQSGSDRILRAMRRSY
RSEKFLGILDRVRAKIPNAAITTDIIVGFPGETDEDFEETMRVVEAARFTAAFTFQYSIR
EGTPAATMDDQVPKHVVQERYDRLIALQERISLEENHRQVGHEVEVLVSTGEGKKDAATH
RLTGRAEDNRLVHFEVPEGSDVPRPGDVVSVVITHAAPFHLLADAPDGAPLRIRRTRAGD
AWDRSQAESCAVPAHGSTPSGAVSLGLPTLRIGV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaccactccgtctccagcgccgacgatcatcgcgccctcgcccgctgcgctcgctccc
gacggtcgtgcccgcacgtacgaggtgcgcacgttcggctgtcagatgaacgtgcacgac
tcggagcgactgtcgggctcgttggagagcgccggctacgtcccggtcgaggccggcggc
gaggccgacatcatcgtgatcaacacctgcgcggtgcgcgacaacgcagccgggaagctc
tacggcacgctcggacacctgaagtcccgcaaggaacaccacgcggggatgcagatcgcc
gtcggcggctgcctcgcccagatggacaagcagacggtcctcgacaaggcgccatgggtc
gatgtcgtgttcggcacgcacaacatgggctcgctcccgcgcctgctggagcgcgcacgc
cacaacgaggaggccgagctcgagatcctcgagtcgctcgaggtcttcccgtcgaccctg
cccaccaagcgcgacagcgtgcactccggctgggtgtcgatctcggtgggctgcaacaac
acctgcaccttctgcatcgtgccgagcctgcgaggcaaggagaaggaccgccggcccggc
gacatcctgagcgagatcggccttctcgtcgaggacggcgcgatcgaggtcaccctgctc
ggccagaacgtcaactcctacggcgtcgagttcggcgaccggcaggccttcggcaagctg
ctgcgcgcggcggggcagatcgagggactcgagcgcatccgcttcacgagcccgcatccg
gccgccttcaccgacgacgtgatcgacgcgatggccgagacgcccgccgtcatgccgcag
ctgcacatgccgctgcagtcgggcagcgaccgcatcctgcgggcgatgcggcgttcgtac
cgcagcgagaagttcctcggcatcctcgaccgcgtgcgggcgaagatcccgaatgcggcg
atcacgaccgacatcatcgtggggttcccgggcgagaccgacgaggacttcgaagagacg
atgcgcgtcgtcgaggccgcgcggttcaccgcggccttcacgttccagtactcgatccgt
gaaggcaccccggccgcgaccatggatgaccaggtgccgaagcatgtggtgcaggagcgg
tacgacaggctcatcgccctgcaggagcgcatctcgctcgaggagaaccacaggcaggtg
ggccacgaggtcgaggtgctcgtgtccacgggcgagggcaagaaggatgcggcgacccac
cgcctgaccggccgtgccgaggacaaccggctcgtgcatttcgaggtgccggagggatcg
gacgtcccgcgtccgggcgatgtcgtctcggtcgtgatcacccacgccgctccgttccat
ctgctcgccgatgctcccgacggcgcacccctgcgcatccgccgcacgcgcgccggcgac
gcgtgggaccgttcgcaggccgagtcctgtgcggtccccgcgcacggctcgacgcccagt
ggcgcggtgtcgctcggactgccgacactccgcatcggcgtgtga
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