KEGG   Marinomonas rhizomae: KDW99_01350
Entry
KDW99_01350       CDS       T08610                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
mrhi  Marinomonas rhizomae
Brite
KEGG Orthology (KO) [BR:mrhi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mrhi02044]
    KDW99_01350 (tssC)
Secretion system [BR:mrhi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   KDW99_01350 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UTV99822
LinkDB
Position
323623..325119
AA seq 498 aa
MTDTTATLDPQTQTQTLEQTSLLDQVIGATKQTESTVAKDLLKTLVDGAMEGTVVWDRNI
AKTINQAIDLLDHKLSEQLNEVMHSEEFLALEGSWRGLSYLVHNSETNSALKLKMLNLSK
RDLYKDLDRAVEFDQSEMFKKIYEEEFGTPGGEPFGAMIGDYAFDSSPNDIELLSKMSNI
SAAAFCPFIASAGPQLFGLESWTELSRPRDLEKIFDSKEYIKWRSFRDTEDSRFLSLTLP
RVLARLPYGDKTKPIDAFGYEEAPIDQGGTARVSDHDDYCWMNAAYVMGSRMTHAFSTTG
WCTAIRGAEGGGRVEDLPTHVFTSDDGDLDLKCPTEIGLTDRREAELSKLGFLPLCHYKN
TDYAVFFGGQTTQKPKIYDRPEATANAAISARLPYMMATSRFTHYLKVMGRDKIGSFMEK
DDVESWLNRWLLNYVNNNPDSGQEMKARYPLREAKVQVTEIPGRPGSYNVVAWMRPWLQL
EELTASMRMVARIPQMGN
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgacagatactacagcaacactagacccacagacgcaaacccaaacgcttgagcaaaca
agtttacttgatcaagtgatcggtgcgaccaaacaaactgagagcacggtagcgaaagat
ttacttaaaacattagtagatggtgcgatggaaggcactgtggtttgggatcgaaatatc
gccaagactatcaatcaagcaatcgatctactggaccataagctttctgagcaacttaat
gaagtcatgcactcagaagagtttttagcattagaaggttcgtggcgtggtcttagctat
ttggtacataactctgaaacaaactctgcgttaaaactgaaaatgctgaatcttagtaaa
cgtgatctttataaagacttagatcgtgctgttgagtttgatcaaagcgaaatgtttaaa
aagatttacgaagaagagtttggtacaccgggtggtgagccgtttggcgctatgattggc
gattatgcgtttgatagttctccaaatgatattgaactgctgtcgaaaatgtctaacatt
tctgctgcagcattctgtcctttcattgcatctgctggccctcagctgttcggattggaa
agctggactgaattatcacgtccacgcgatctagaaaaaatctttgattctaaagaatat
attaaatggcgtagtttccgcgatactgaagactcacgttttctatcattaacgctacca
cgcgtcttggctcgtttgccctatggtgacaaaaccaagcctattgatgcgttcggttat
gaagaagcaccgattgatcaaggtggtacagcacgtgtgagtgatcatgatgattattgc
tggatgaacgctgcttatgtaatgggctcgcgcatgacacatgccttctcaacaacaggc
tggtgtactgctatccgtggtgcagaagggggtggtcgtgtagaagatttaccgacgcat
gttttcactagtgatgatggcgacttagatcttaagtgtccaaccgagattggcttgacg
gatcgtcgtgaagcggagctatcgaaactaggcttccttcctttgtgccattataaaaac
acagattacgcagtgttctttggtggacaaactactcaaaaaccaaaaatctatgaccgt
ccagaagcgaccgctaatgcggcgatctctgctcgtctaccatacatgatggctacctct
cgctttacgcattacctgaaagtaatggggcgagacaaaatcggttccttcatggaaaaa
gacgatgtggaatcttggttaaaccgctggttgcttaactatgtgaacaataatccggac
tcaggacaggaaatgaaagcccgttacccgcttcgtgaagcgaaggttcaggtgactgaa
attccaggtcgtcctggatcttacaatgttgtcgcgtggatgcgcccttggctacaactg
gaagagttgactgcatctatgcgtatggttgcgcgtatccctcaaatgggcaactaa

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