Minicystis rosea: A7982_06740
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Entry
A7982_06740 CDS
T04613
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mrm
Minicystis rosea
Pathway
mrm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7982_06740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrm03019
]
A7982_06740
Enzymes [BR:
mrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A7982_06740
Messenger RNA biogenesis [BR:
mrm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A7982_06740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
APR81393
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All DBs
Position
7775977..7777734
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AA seq
585 aa
AA seq
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MRASRPSVSPRDQGIPNDLDDPLLERAGSRLRPPADASREGTHGAPVRRGCAEHVDHARA
RDPQKNSMHFSDLQLLPAILRAVTEEGYDVPTPIQQQAIPHVLTGRDLLGCAQTGTGKTA
AFALPILQRLATTEPTGRKKPIRVLVLTPTRELAAQIGESFATYGRHLRFRHAVIFGGVG
QLQQERALAAGPEILVATPGRLLDLASQGKVSLRDLEIFVLDEADRMLDMGFIHDVRRVI
ALLPERRQSLFFSATMPPDIMDLSARILTDPARVAVTPIASTAEKIQQHVYFVDKSHKRA
LLEHVLQDPAIERALVFTRTKHGANRVAEHLEKARIGAAAIHGNKSQNARERALSGFKEG
STRVLVATDIAARGIDVDGVTHVINFDLPEVPESYVHRIGRTARAGASGIAFSFCDSEER
SLLWAIERLIRMKVNVVEEHPLRNAAPRPVEPREQVRNYGPRNDGRQQHGARHDGRRPQQ
QGGRSEGQRAHGDGQRTNGNGQRPSHGNGQRTNGNGQRAHGDGQRGHNGHRGDGQRAHEA
RRPHEARIPSEAARPQGEGAAASNTQAGQKPRHFGGRPQRRYAQY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcctcgcgcccgtccgtttcgccgagagaccagggaatcccgaacgacctcgac
gacccactgctagagcgcgccggctctcgtcttcggcctcctgccgatgcgagccgcgaa
ggtactcacggcgcgcccgtccggcgcggctgcgccgaacacgtcgatcacgcccgagcg
cgtgatccgcagaagaacagcatgcatttttccgatcttcagttgctccccgccatcctc
cgtgccgtcaccgaggaaggctacgacgtccccacgcccatccagcagcaggccatcccg
catgtcctcacgggccgcgatctcctgggttgcgcgcagacgggcacaggcaagacggcg
gcgttcgccctcccgatcctccagcgcctcgcgaccaccgagccgaccgggcgcaagaag
cccatccgcgtgctggtgctcacgccgacgcgcgagctcgcggcgcagatcggggagagc
ttcgcgacgtacgggcggcacctgcgcttccggcacgcggtgatcttcggcggcgtgggg
cagctccagcaggagcgcgcgctcgcggcggggcccgagatcctcgtggccacgccgggc
cggctgctcgacctggcgtcgcagggcaaggtgtcgctgcgcgatctcgagatcttcgtc
ctcgacgaggccgatcgcatgctcgacatgggcttcatccacgacgtgcggcgcgtgatc
gcgctcctccccgagcggcgccagtcactgttcttctcggcgacgatgccgcccgacatc
atggatttgagcgcccgcatcctcaccgatccggcgcgcgtggcggtgacgcccatcgcc
tccacggcggagaagatccagcagcacgtgtacttcgtcgacaagtcgcacaagcgcgcg
ttgctcgagcacgtgttgcaagatccggccatcgagcgcgcgctcgtgttcacgcggacc
aagcacggcgcgaaccgcgtggccgagcacctggagaaggcgcgcatcggcgcggccgcc
atccacggcaacaagtcgcagaacgcgcgcgagcgggcgctctccggcttcaaggagggg
tcgacgcgggtgctggtcgcgacggacatcgcggcccgcgggatcgacgtggacggcgtg
acgcacgtcatcaacttcgatctccccgaggtgcccgagagctacgtgcaccgcatcggc
cgcacggcgcgcgcgggcgcgagcgggatcgcgttctccttctgcgacagcgaggagcgc
agcctgctctgggccatcgagcggctgattcggatgaaggtcaacgtcgtggaggagcac
ccgctgcgcaacgcggcgccgcgtccggtcgagccgcgcgagcaggtccgcaactacggg
ccgcgcaacgacgggcgccagcagcacggcgcgcgtcacgacggccgccgcccgcagcag
cagggcggccgctccgaaggccagcgcgcgcacggcgacgggcagcgcacgaatggcaac
gggcagcgcccgagccacggcaatgggcagcgcacgaatggcaatgggcagcgcgcgcac
ggcgacgggcagcgcggccacaacggccaccgcggcgacgggcagcgcgcgcacgaggcg
cggcggccccacgaggcgcggatcccgagcgaggctgcgcggccccaaggcgagggcgca
gccgcgagcaatacgcaggctgggcaaaagccgcgtcacttcggcgggcggccgcagcgg
cgctacgcgcagtattga
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