Mucilaginibacter robiniae: HH214_06160
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Entry
HH214_06160 CDS
T08554
Symbol
ligD
Name
(GenBank) DNA ligase D
Organism
mrob
Mucilaginibacter robiniae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_C
DNA_ligase_A_M
mRNA_cap_enzyme
DNA_primase_S
SoxZ
Motif
Other DBs
NCBI-ProteinID:
QJD95486
UniProt:
A0A7L5E572
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Position
complement(1385506..1388034)
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AA seq
842 aa
AA seq
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MSLANYNAKRDFTRTSEPKGGKSATGELRFVVQRHHASRLHYDFRLELDGVLKSWAVPKG
PSMNPGDKRLAMMVEDHPYNYQYFEGIIPAGEYGGGVVITWDQGTYTSLSTSRKEDVKTL
RAGLKSGDLKFRLNGEILKGEFALVKLHKGEAEDNAWLLIKHQDAFAKGKFNSEDFVPVT
IKQLKNNKDGKLTQLPKHSPVKRVHAEKNGPASAKQEKKKAGTVYQPMLATLAQHLTDDP
DWLYEPKLDGYRAIGYTGKKAAALISRNGIAFNDKYTAAFEALQAMDTGAVVDGEIVLEN
GHGKSAFQDLQNYDSEKSRRTLRYYLFDLLELNGHDLRELPLIKRKALLKAFLDNQPQND
TVVYLEYTAATGSELLVQSQKEGWEGIIGKDSNSGYESGRRSDRWLKYKVQASQEAVICG
YTAPKGSRSHIGSLILGIWQDDTLRYVGNCGTGFDEASLKDLYMRLQPLKTDDKPFTDKV
SYHGKVQWVRPELVCEVTFAEWTAEGSMRHPVYKGLRMDKQAEEVVPEGFAQPFADEQTI
KVGKQTLRLTNQNKLYWPDEGITKGELLAYYRDLAPHLMPYLKDKPISMRRQPNGISDAG
FFQKDTDTAHLPGWVNTYRLYSESNDKDINYIIGRDEATLLYMVNLGCIEINPWLSNYQT
PDHPEYLVIDLDPHDVPFSQAVEAALKTKEVFDRLQLPCFVKTSGSKGLHIYCYVGGVYE
YAIVRKFAEYLANMIHEELPDTTSIERNPAKRKNKTYIDFLQNRRGQTIAAPYSVRPKRG
ATVSTPLHWQEVNGELSLSDFTIYTLPDRLKHVADPWLALHAVKADLQQALSLVQPASTI
GR
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgagccttgccaactacaacgccaagcgggatttcaccaggacatcggaacccaaaggc
ggcaaatcggctacaggggaactgcgctttgtggtgcagcggcaccatgcctcgcgcctg
cattatgatttccggctggaactggacggtgtactcaaaagctgggcggtgcctaaaggc
ccgagcatgaaccctggcgataaacggctggcgatgatggtggaggatcacccgtataac
taccagtatttcgaaggcatcatccctgccggtgagtacggcggcggcgtggtcatcacc
tgggatcaagggacttatacttcactctctacttcccgcaaggaggatgtcaagacgctg
cgtgcaggcctgaagtcgggtgacctaaagtttcggctgaatggcgaaattcttaaaggg
gagtttgcgctggtcaagctgcacaagggggaggcggaagacaacgcttggctgctcatc
aagcaccaggatgcatttgccaaaggtaagttcaacagcgaggatttcgtaccggttact
attaagcagctaaagaacaacaaggatggcaagcttacccaattgcccaagcattcgccg
gtaaagcgggtccatgcggagaagaatgggcccgcatcagcaaaacaggagaagaaaaaa
gcaggtactgtctaccagcctatgctggcgaccctggcgcagcatctcaccgatgatccc
gactggctctatgagccgaagctggacgggtaccgggcgatcggctataccggtaaaaag
gctgccgccctcatctcccgcaacggaatagcattcaatgataaatatacagccgcgttt
gaagcactgcaggcgatggatacaggcgcggtcgtggatggcgagatcgtgctggagaac
gggcacggcaaaagtgcctttcaggacttgcagaactatgacagcgagaaaagccggcgc
accctgcgctattatctctttgacctgctggaactgaacgggcatgacctgcgggaactg
ccgctcattaaacgcaaggcgctgctgaaagcctttctggataaccagccccaaaatgac
accgtcgtttaccttgaatatacggccgctacagggtcggaactgctcgtgcaatcacag
aaagaaggctgggaaggcatcattggcaaggacagcaacagcgggtacgagtccggccgg
cgttccgaccgctggctgaaatataaagtgcaggcctcgcaggaagccgtcatctgcggc
tatacggcgcccaaaggcagccggagccatatcggctcgctgatcttgggaatctggcaa
gatgacacgctccggtatgtcggcaactgcggcaccggctttgacgaggccagcctgaaa
gacctgtatatgcggctgcaaccgctgaaaaccgatgacaagccgttcacggacaaggtg
agctatcacggcaaggtgcagtgggtaaggccggagctggtttgtgaggtgacttttgcc
gagtggacggccgaaggcagcatgcggcacccggtgtataaaggattgcgcatggacaag
caggcagaagaagtcgtgccggaagggtttgcacaaccctttgctgacgaacaaacgatc
aaggtgggtaagcagacacttaggctaaccaaccagaacaagctctactggccggatgag
ggcatcaccaaaggagaattgcttgcttactaccgcgacttagcgccgcacttgatgcct
tatctgaaagataagcccatctccatgcgccggcagccgaacgggatcagcgatgccggg
ttctttcagaaagatactgatacggcgcacctgccgggctgggtcaacacttaccggttg
tattcggaaagcaacgacaaagacatcaactatatcattggaagagatgaagcgacatta
ctgtatatggtcaacctgggctgtatcgagatcaatccctggctgagcaactatcagacg
ccggatcacccggagtacctggtcatcgatctggacccgcatgatgtgccgttcagccag
gcggtggaagcggcgctgaaaacgaaagaagtatttgaccggctgcagttgccttgcttt
gtgaaaacctccggctccaagggcctgcatatttactgctatgtgggtggagtctatgaa
tatgcaattgtgcgcaagtttgcggagtacctggcgaacatgatccatgaggagctgccg
gatacgaccagcatcgagcgcaacccggccaaacgcaaaaacaagacttatatcgacttc
ctgcagaaccgcagggggcagaccattgcggccccttactctgtccggcccaaacgcggg
gcaaccgtttccacgccgctgcactggcaggaggtcaacggtgagctttcgctgtcggac
tttacgatttacaccctgccggaccggctgaagcatgtggcggatccttggttagcgctg
cacgcggtcaaggccgatttacagcaggccctgtcactcgttcaacctgcatcaaccatt
ggaagatga
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