Mycobacterium sp. JS623: Mycsm_01081
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Entry
Mycsm_01081 CDS
T02423
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
msa
Mycobacterium sp. JS623
Brite
KEGG Orthology (KO) [BR:
msa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msa03016
]
Mycsm_01081
Enzymes [BR:
msa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Mycsm_01081
Transfer RNA biogenesis [BR:
msa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mycsm_01081
Prokaryotic type
Mycsm_01081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AGB21506
UniProt:
L0ITH9
LinkDB
All DBs
Position
1097460..1098329
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AA seq
289 aa
AA seq
DB search
MNEPAIDSGGGFVRLRLDIAYDGTEFAGWAVQAGQRTVAGVLDEALSTVFRVPVVLRAAG
RTDAGVHATGQVAHVDVPADALVHGYPRTSREGDSEFLPLVRRLGRFLPADVRVVDIDRA
AAGFDARFSALRRHYVYRISTAPYGVEPQEARFVTAWPRPLDVDAMSAASRNLVGLHNFA
AFCRHREGATTIRDLQRLDWSRDGDRVTAYVSADAFCWSMVRSLVGALLAVGEHRREPGW
CAGLLTSTQRSSDFAGAPPQGLTLVGVDYPPDDQLEARTKVTRELRVVD
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaacccgccatcgattccggtggcgggtttgttcgtcttcggctcgatatcgct
tacgacggaaccgaattcgctggatgggcggttcaggccggccagcggaccgtggccggt
gttctcgacgaggcgctatcgacggtgttccgggtaccggtggtcctgcgcgcggctggc
cgcaccgacgcaggtgtgcatgcgacgggtcaggtcgctcacgttgacgtgcccgccgat
gcgttagtgcatggctacccccgcaccagccgcgagggcgacagtgagttcttgccgctc
gtgcgacggctcgggcggttcttgcctgcagatgtacgtgtcgtcgacatagaccgtgcc
gcagcgggtttcgacgctcggttctcggcgttgcgtcgccattacgtctatcggatctcg
accgcgccgtacggcgttgagccgcaggaggcgcgcttcgtgacggcatggccgaggccg
ctcgacgtcgacgcgatgtcggccgcgtcccgaaacctggtggggctgcacaacttcgcc
gcgttctgccgtcaccgtgagggcgccacgacgattcgcgatctgcagcggctggactgg
tcccgcgacggcgaccgcgtcaccgcatacgtcagcgcagacgcgttctgctggtcgatg
gtgcggtcattggtcggtgccctgctggcggtcggcgaacatcgacgcgaacctggttgg
tgcgcagggctgttgacgtcgacccagagatcaagcgatttcgccggagcgcccccgcag
ggcctgaccctcgtcggcgtcgactaccctcccgacgaccaactcgaggcgcgcacgaag
gtcacgcgcgaactccgggtggtcgactag
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