Mucispirillum schaedleri: N508_000206
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Entry
N508_000206 CDS
T08201
Symbol
rny_1
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
msch
Mucispirillum schaedleri
Pathway
msch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N508_000206 (rny_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msch03019
]
N508_000206 (rny_1)
Messenger RNA biogenesis [BR:
msch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
N508_000206 (rny_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
UBA_E1_SCCH
Motif
Other DBs
NCBI-ProteinID:
USF23151
UniProt:
V2QE14
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Position
191763..193319
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AA seq
518 aa
AA seq
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MSYYIIVGLVCVLAGLAAGYLVAKKMKEEENKKLNNTAEDIISKAKKEGEEIIKEAKLES
KEIIFKGRQDLEKEIKEKKKDISHIERKLEAREETLEKKMESALRKEEQLVKRDQEYDRR
MKDIDVIKAKNEEIKQSLIKEVERVACMTGEEAKKMLIEQMVDEAKKDSARTIRELEEEA
KNESEKRARSIISTAIQRCASEFTNDITVTLVNLPNDEMKGRIIGREGRNIRTFETITGV
DIIVDDTPEAVILSSYDPFRRETAKLTLEKLITDGRIHPARIEELHQKSRQEMDKHILEL
GEETVFNLGIHNISHEILKLIGRLKYRTSYGQNVLGHSIEVATIAGIMAAELGLDPKIAK
RAGLLHDIGKAIDYEAEGSHTTIGVEVAKKNKEDWRIINAIASHHGEEEFKCIEAILVQA
SDAISASRPGARREVLESYIKRLEQLEEVASSFEGVAKSFAIQAGREVRIIVEPDKVNDD
GLVVLSKDISKKVEEELTYPGQIKVMVIRESRAIEYAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagctattatattatagttgggcttgtttgtgtattggcaggtcttgcagctggatat
ttagttgctaaaaaaatgaaagaagaagaaaataaaaaattaaacaatacagcagaagat
ataatttcaaaagctaaaaaagagggcgaagaaattataaaagaagcaaaattggaatcc
aaagaaattatttttaaaggacgacaggatttagaaaaagaaataaaagaaaagaaaaaa
gatatcagccatattgagcgtaaacttgaagccagagaagaaaccttagaaaagaaaatg
gaatcagctttacgcaaagaagaacagcttgttaaaagagatcaggaatatgacaggcgt
atgaaagatattgatgttattaaagctaaaaatgaagaaattaaacaaagtttaattaaa
gaagtagagcgtgttgcctgcatgactggcgaagaagcaaaaaaaatgcttatagaacaa
atggttgacgaagctaaaaaagattctgcaagaactataagagagttagaagaagaagcg
aaaaatgaatctgaaaaaagagcaagaagtataatttctactgctattcaacgctgtgct
tctgaatttacaaatgatattactgttacattagtaaacctgccaaatgatgaaatgaaa
ggtcgtattataggcagggaaggcagaaatattagaacatttgaaactattactggtgtt
gatattattgttgatgatacgccagaagccgttattttatcaagctatgatccatttcgc
agagaaactgctaaattaacattagaaaaattaattactgatggcagaattcatcctgca
agaattgaagaactgcaccaaaaaagcaggcaggaaatggataaacatattttagaactt
ggagaagaaactgtatttaacttaggtattcacaatataagccatgaaatattaaaactt
attggcaggttaaaatacagaacaagttatggtcaaaatgtattaggtcattcaatagaa
gttgcaactattgcaggtattatggcagcagaacttggacttgatccaaaaattgctaaa
agagcagggctgttacacgatattggtaaagcaatagattatgaagcagaaggttcgcat
acaacaattggtgtggaagtagctaagaaaaataaagaagactggcgtataattaatgct
attgccagccaccatggtgaagaagaatttaaatgtattgaagccatacttgttcaggca
agtgatgctatatctgcctcacgccctggtgcaagacgagaagtattagaaagctatatt
aaacgacttgaacagcttgaagaagttgcatcttcttttgaaggtgttgcaaaatcattt
gctattcaggcaggaagagaagttagaattattgtagagcctgataaagtaaatgatgat
ggattagttgttctttccaaagatatttctaagaaagtagaagaagaattaacttatcct
gggcagataaaagttatggttatcagggaatctagagctatagaatatgctaaatag
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