Microbacterium sediminis: E3O41_03800
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Entry
E3O41_03800 CDS
T06576
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
msed
Microbacterium sediminis
Pathway
msed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E3O41_03800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msed03400
]
E3O41_03800
Enzymes [BR:
msed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
E3O41_03800
DNA repair and recombination proteins [BR:
msed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
E3O41_03800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QBR73626
UniProt:
A0A1B9NCD6
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All DBs
Position
complement(794086..794985)
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AA seq
299 aa
AA seq
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MTSRPLRIASINVNGIRAAARKGMGAWLEEAAPDIVTLQEVRGELEHLEEAMPGWRVIAD
ASLQKGRAGVAIASREECAISRVELGDDGLESSGRWIEADFEVGGETLTVVSAYVFTGEA
ETPAKQDPKWAFLDAMEHRMTELAADGALALVTGDLNVGHRPLDIRNWKGNVKKAGFLAR
ERAYFDRILTPAGEPVAGQEGIGRGMVGELSDTRSYSAGATGLGWVDVGRAAHGEVDGPY
TWWSMRGKAFDTDTGWRIDYHLASPALAPRASNYRVDRAPSYDTRWSDHAPVVAEYAIG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccgccccctccgcatcgcgtccatcaacgtcaacggcatccgggcggcggcc
cgcaagggcatgggcgcgtggctcgaggaggccgcgcccgacatcgtcacgctgcaggag
gtccgcggcgagctcgagcacctcgaggaggcgatgcccggctggcgcgtgatcgccgac
gcgtcgctgcagaaggggcgcgcgggcgtcgccatcgcctcgcgcgaggagtgcgcgatc
tcgcgcgtcgagctgggcgacgacggcctcgagtcgagcgggcgctggatcgaggccgac
ttcgaggtcggcggcgagaccctcacggtcgtcagcgcctacgtgttcacgggcgaggcc
gagacccccgccaagcaggacccgaagtgggccttcctcgacgcgatggagcaccgcatg
acggagctggcggccgacggcgccctggcgctcgtgactggcgacctcaacgtggggcat
cggccgctcgacatccgcaactggaagggcaacgtcaagaaggccggcttcctggcgcgc
gagcgggcgtacttcgaccgcatcctcacgccggcgggcgagcccgtcgccgggcaggag
ggcatcggccgcggcatggtgggcgagctcagcgacacccggtcgtacagcgccggggcc
acggggctcggctgggtcgacgtgggccgcgccgcgcacggcgaggtcgacggcccgtac
acctggtggtcgatgcgcggcaaggccttcgacaccgacaccgggtggcggatcgactac
cacctggcctcccccgcgctcgcgccgcgggcgtcgaactaccgcgtcgaccgcgcgccg
tcgtacgacacccgctggagcgaccacgccccggtggtggccgagtacgcgatcggctga
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