Mycolicibacterium sediminis: MSEDJ_36720
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Entry
MSEDJ_36720 CDS
T07629
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MSEDJ_36720 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msei03400
]
MSEDJ_36720 (ruvB)
Enzymes [BR:
msei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSEDJ_36720 (ruvB)
DNA repair and recombination proteins [BR:
msei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSEDJ_36720 (ruvB)
RecFOR pathway proteins
MSEDJ_36720 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
TIP49
AAA_5
AAA_16
Mg_chelatase
nSTAND3
AAA_14
RNA_helicase
AAA_3
Zeta_toxin
Resolvase
IstB_IS21
TsaE
Rad17
AAA_18
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
BBY29576
UniProt:
A0A7I7QUK8
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All DBs
Position
3790742..3791818
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AA seq
358 aa
AA seq
DB search
MGRFSEDVDGDGGPDDDRDVSAALTVGEGDVDASLRPKSLREFIGQPRVREQLQLVLEGA
KNRGGTPDHILLSGPPGLGKTSLAMIIAGELGSSLRVTSGPALERAGDLAAMLSNLVEGD
VLFIDEIHRIARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALT
GPLRDRFGFTAHMDFYEPSELERVLSRSAGILGIELGGDAGSEIARRSRGTPRIANRLLR
RVRDYAEVRADGIITRDIAKLALAVYDVDELGLDRLDRAVLSALTRSFGGGPVGVSTLAV
AVGEEATTVEEVCEPFLVRAGMIARTPRGRVATTTAWRHLGLVPPTGVNALGQPDLFE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgggccggttctccgaggacgtcgacggggacggcggccccgacgacgaccgggacgtc
tcggcggcgttgaccgtcggcgagggtgacgtcgacgccagcctgcggccgaagtcgctc
cgggagttcatcggacagccgcgggtgcgcgagcagctgcaactggtcctggagggcgcc
aagaatcgcggcggaacgcccgaccacatcctgctgtccgggccgcccgggctgggcaag
acctcgctcgcgatgatcatcgccggcgaactcgggtcgtcgctgcgcgtcacctcgggg
cccgccctggaacgcgccggggacctggccgccatgctgtcgaacctcgtcgagggcgac
gtgctgttcatcgacgagatccaccgcatcgcgcgtcccgccgaggagatgctgtacctc
gcgatggaggacttccgcgtcgacgtcgtcgtcggcaaggggccgggcgccacgtcgatc
ccgctcgaggtcgcgccgttcacgctcgtcggggccaccacgcggtccggagcgctgacg
ggcccactgcgggaccggttcggcttcaccgcgcacatggacttctacgaaccctccgag
ctggagcgggtgctgtcccggtcggccgggatcctggggatcgagctgggtggcgacgcg
ggctcggagatcgcccgtcggtcgcgcggcaccccacgcatcgccaaccggctgctgcgg
cgcgtccgggactacgccgaggtacgggcggacggcatcatcacgcgcgacatcgcgaag
ctcgcgctcgcggtctacgacgtcgacgaactcgggctggaccgcctcgaccgcgcggtg
ctgtcggcgctcacgcgcagcttcggtgggggaccggtgggcgtgtccacgctggcggtt
gccgtcggggaggaggcgaccaccgtcgaagaggtgtgtgaaccgttcctggtgcgggcg
gggatgatcgcccggaccccacgcgggcgggtcgccacgacgacggcgtggcgccacctc
ggcctcgtgccgccgaccggggtcaacgcgctgggccagcccgacctcttcgagtaa
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