Mycolicibacterium senegalense: K3U95_05840
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Entry
K3U95_05840 CDS
T07649
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
msen
Mycolicibacterium senegalense
Pathway
msen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K3U95_05840 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msen03400
]
K3U95_05840 (recB)
Enzymes [BR:
msen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K3U95_05840 (recB)
DNA repair and recombination proteins [BR:
msen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K3U95_05840 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
PDDEXK_1
UvrD_C_2
AAA_25
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QZA25594
LinkDB
All DBs
Position
complement(1289264..1292518)
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AA seq
1084 aa
AA seq
DB search
MKVFDLLGPLPQANSTTVLEASAGTGKTFALAGLVTRLVAEGAATLDQMLLITFGRAASQ
ELRERVRAQIVGALLALEDPARADNDLLQHLVAEDQQARGQRLRDALAGFDAATIATTHQ
FCQIVLKSLGVAGDSDSGVTLVESLDDLVCEIVDDLYLAHFGAQRDVPELGYAEALRLAR
VVVANPATELRPLDPEPESPAGIRVAFARAVLAELEIRKRRRGVLGYDDLLTRLAGALQS
ENSAARVRMAQRWPIVMVDEFQDTDPVQWQVIERAFSGQSTLILIGDPKQAIYAFRGGDI
DTYLRAAATAGDKQTLGTNWRSDSVLVDRLQAVLRGAELGGPDIVVHDVQANHQGHRLAG
APHNDPFRLRVVTRNRPGTKVIPISDLREHIGRDLAADIGALLTSGATFGGDPLQARDIA
VIVETHKDARACHTALLAAGIPAVYTGDSDVFNSEAAEDWLYLLEAFDQPHRPGLVRAAA
ATMFFGETAETLAAGGDALTDRVADTLRTWAGHARERGVAAIFEAAQLAGMGKRVLSWQG
GERLMTDLAHMTQLLGDTAHREGFGLAALRDWLRTQRSEGGGESERNRRLDSDAAAVQIM
TVWVSKGLQFPIVYLPFAFNRYVPEPDLVLFHDEGVRCLQVGGPDPAVTRAGRAEAAADD
SRLTYVAMTRAQSQVVAWWAPSNDEPNGGLSRLLRGRAPGEAAVPDRCAPAKVSDDDALA
RLRAWEAAGGPTLEESVVLPAAPVPTHDVPDGLAARHFHRSIDTAWRRTSYSGLLRAAED
DGHAGVSSEPEVVELDDESTDIAVIAAAQGADVPSPMASLPTGAAFGSLVHAVLETADPL
AADLPAELLAEVRRHAARWPVEVSAEELAGALLPMLDTPLGPLAPGVTLRQIGLADRLCE
LDFEFPMAGGDLRGGEFARLADVGALLDEHLPADDPMAGYADRLSTGLLGRQPLRGYLSG
SVDVVLRIGGRFVVVDYKTNWLGTGDEPLTAADYGRDRMAEAMLHSDYPLQALLYSVVLH
RFLSWRLPDYDPATHLGGVMYLFVRGMCGVQTPVVDGHPAGVFSWKPPAALVIAMSQLLD
QGAA
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtcttcgatctgctcggcccgttgccgcaagccaacagcaccacggtgctggag
gccagcgcgggcaccggcaagacgttcgccctggcgggcctggtaacgcggttggtggcc
gagggagcggcgacgctcgatcagatgctgctcatcaccttcggccgggcggccagccag
gagttgcgcgagcgggtgcgggcccagatcgtcggcgccctgctggcattggaggatccg
gcgcgcgccgacaatgacctgttgcagcacctggtggcagaggatcagcaggcccgaggg
cagcgactgcgtgacgcgctggccggtttcgatgcggcgaccatcgccaccacgcaccag
ttctgtcagatcgtgctgaaatcgctcggcgtggccggggacagcgattcgggtgtgacg
ctggtcgaaagtctcgacgacctggtgtgcgagatcgtcgacgatctgtatctggcccac
ttcggtgcgcagcgcgacgtccccgagctgggctatgccgaggcgctgcggctggcccgc
gtggtggtggccaatccggcgactgagctgcggccgctggaccccgaaccggagtccccg
gcgggaattcgggtggccttcgcgcgggcagtgttggcggagttggagattcgcaagcgc
cgccgaggtgtgctgggttatgacgacctgctgacccggctggccggggcgctgcaatcc
gagaactccgcggcccgggtgcgcatggcgcagcgctggccgatcgtgatggtcgacgag
ttccaggacaccgacccggtgcagtggcaggtgatcgagcgggcgttctccgggcagtcg
accctgattttgatcggtgaccccaagcaggcgatctatgcgttccgcggcggggatatc
gacacctatctgcgggccgcggccactgccggagacaagcagacgctgggcaccaactgg
cgcagcgacagcgtgctggtggatcgcttgcaggcggtgttgcggggggccgaactcggt
ggccccgacatcgtggtgcacgacgtgcaggccaaccaccagggccaccggctggccggg
gcgccgcacaacgatccgttcaggctgcgcgtggtgacgcgaaaccggcccggtaccaag
gtgattccgatctctgatttgcgtgagcacatcggaagggatctggccgccgacatcggc
gcgttgctgaccagcggcgccaccttcggcggcgacccgctgcaggcccgcgacatcgcg
gtgatcgtcgagacccacaaggacgcccgggcctgccacaccgcgctgctggcggccggc
attcccgcggtctacaccggggattcggacgtgttcaattccgaggccgccgaagattgg
ctgtacctgctggaagcgttcgaccagccgcaccggcccgggttggtgcgggccgccgca
gccacgatgttcttcggcgagacggcggaaacccttgccgccggcggggatgcgttgacc
gatcgggtggccgatactttgcgcacctgggccggccatgcccgtgagcgcggagtcgcg
gcgatcttcgaggccgcgcagttggccggcatgggcaagcgggtgctgtcctggcagggc
ggtgagcggttgatgacggacctggctcacatgacccaactactcggcgacaccgcgcac
cgggagggcttcgggctggccgctctgagggactggctgcgcacccagcgctcggagggc
ggtggtgaatccgaacgcaaccggcgtctggacagcgacgcggccgcggtgcagatcatg
acggtgtgggtgagcaagggcttgcagttcccgatcgtgtacctgccgttcgccttcaac
cggtacgtgccggaaccggatctggtgttgttccacgacgagggggtgcgctgcctgcag
gtcggtggccccgacccggcggtgacccgggccgggcgggccgaggccgccgccgatgac
agccgtttgacctatgtggcgatgacccgggctcagtcgcaggtggtggcatggtgggca
ccgtccaacgacgagcccaacggcggtctgtcgcggctgctgcgcgggcgggcgcccggc
gaggccgcggtgcccgaccggtgcgccccggccaaggtctccgacgacgacgcgctggcg
cggctgcgggcgtgggaggccgcgggtggcccgacgctggaggagtcggtggtccttccg
gccgccccggtgcccacccacgatgtaccggatggtttggcggcgcggcattttcaccgc
tcgatcgataccgcgtggcggcgcacgtcgtactcgggactgttgcgggcggccgaggat
gacgggcacgccggggtgtccagcgaaccggaggtcgtcgaactcgatgacgagtcgacc
gacatcgccgtcatcgccgctgcccagggtgccgacgtcccgtccccgatggcgtcgttg
cccaccggggcggcgttcgggtcgctggtgcacgcggtcctggagaccgccgacccgttg
gccgcggatctgccggcagaactgctggccgaggtgcgcaggcacgccgcccggtggccg
gtggaggtgtccgcggaggaacttgccggggccctgctacccatgctcgacaccccgctg
gggccgttggcacccggcgtgacgctgcgccagatcgggctggccgaccggctgtgcgag
ctggacttcgaattccccatggccggcggcgatctgcggggcggcgagttcgcccggttg
gccgacgtcggcgcattgctcgacgagcatctgccggccgacgatcccatggcgggatat
gccgaccggttgtcgacgggactgctgggccgccagccgctgcgcgggtacctgtccggt
tcggtggatgtggtgctgcggatcggcgggcgtttcgtcgtcgtcgactacaagaccaac
tggctgggcaccggggacgagccgctgaccgcagccgattacggccgggaccggatggcc
gaggcgatgctgcactccgactatccactgcaggcattgctgtacagcgttgtgctgcac
cggttcctgagttggcggctgcccgactacgatccggccacccatctgggcggggtgatg
tacctgttcgtgcgcgggatgtgcggggtgcagacccccgtcgtcgacgggcatcccgcc
ggggtgttcagctggaaaccgcccgccgcgctggtgatcgcgatgtcacaactactcgat
cagggagccgcgtga
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