Methanobrevibacter smithii: Msm_1371
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Entry
Msm_1371 CDS
T00539
Name
(GenBank) diaminopimelate decarboxylase, LysA
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
msi
Methanobrevibacter smithii
Pathway
msi00300
Lysine biosynthesis
msi00470
D-Amino acid metabolism
msi01100
Metabolic pathways
msi01110
Biosynthesis of secondary metabolites
msi01120
Microbial metabolism in diverse environments
msi01230
Biosynthesis of amino acids
Module
msi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Msm_1371
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Msm_1371
Enzymes [BR:
msi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Msm_1371
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ABQ87576
UniProt:
A5UMZ8
LinkDB
All DBs
Position
1391486..1392769
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AA seq
427 aa
AA seq
DB search
MDLNIKINDKNHLDIGGADACDIAEEFGTPTYVIDENRIRDNYNRFYNAFSKYYPDFRVY
YACKANTNLAVMRILESEGCCIDAVSPGEVYTSKKLGFPGERILFTGNNVTTEELKFVAE
QGAVLNLDSVSALKRLAEVVDPEGFKISFRVNPMVGAGHHDHCITGGVMSKFGIMDNEAV
EVYQFAEDLGFTPVGMHSHIGSGILDPEPFKLAIESTIDIAGKVHTEAGIDFEFVDFGGG
VGIPYTPEENIVDIDTFAKENIALFKSKLEEHDLGKPTMYLEPGRYLVGDASVLLTRVNS
VKQSYRKFLGVDSGFHTLLRPAMYDSYHHIVLANKMDAPNTQEVDIAGNVCESGDLFARD
RPMPDVEEGDLLAILNAGAYGFTMSSNYNSRPKASEVLVKDGECFLTRERETFEDLFNKQ
IIPDYLQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaatattaaaattaatgataaaaaccacttggatattggtggtgctgatgca
tgtgacattgctgaagagtttggaactcctacctatgtcatagatgaaaacagaataagg
gacaattataacagattctacaatgctttttcaaaatactatcctgattttcgagtatat
tatgcatgtaaagctaacactaacttagcagtaatgaggattcttgaaagtgaaggatgc
tgtattgatgcagtatctcctggagaagtatacacttctaaaaaattaggattccctggt
gagaggatattatttacaggtaacaatgtaactactgaagaattgaaatttgtagctgaa
caaggtgcagttcttaacttggattcagtttcagcattaaaaagattggctgaagttgta
gatcctgaaggatttaaaatatcattcagagtaaatcctatggttggtgcaggacaccac
gatcactgtattaccggaggggtaatgagtaaatttggtattatggataatgaagctgta
gaagtatatcaatttgcagaagacttaggtttcactccagtaggtatgcactcccacatc
ggttcaggaatcttggatccggaaccatttaaattagctatcgaatcaacaattgacatt
gcaggaaaagttcacactgaagcaggcattgattttgaatttgttgattttggaggaggt
gttggaattccatacactcctgaagaaaacattgtagacatagatacatttgcaaaagaa
aatattgcattattcaaatctaaattggaagagcatgatttaggcaaaccaacaatgtat
cttgaacctggaagatacttggtaggagatgcaagtgtgcttttaacccgtgtaaacagt
gtaaaacaaagttacagaaaattcttaggtgtagattcaggattccatactttacttagg
cctgcaatgtatgattcataccatcatattgtattagctaataaaatggatgcaccaaac
actcaggaagtagacattgccggaaatgtatgtgaatcaggagatttatttgcaagagac
aggccaatgcccgatgttgaagaaggagatttattagctattcttaatgcaggagcatat
ggatttaccatgtcttcaaactacaactcaagaccaaaagcatctgaagtccttgttaaa
gacggagaatgtttcttaacacgtgaaagagaaacttttgaagatttattcaacaaacaa
ataattcctgattacttgcaatag
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