Mycolicibacterium smegmatis INHR1: LI99_26000
Help
Entry
LI99_26000 CDS
T03409
Name
(GenBank) farnesyl-diphosphate synthase
KO
K12503
short-chain Z-isoprenyl diphosphate synthase [EC:
2.5.1.68
]
Organism
msn
Mycolicibacterium smegmatis INHR1
Pathway
msn00900
Terpenoid backbone biosynthesis
msn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
msn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LI99_26000
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msn01006
]
LI99_26000
Enzymes [BR:
msn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.68 (2Z,6E)-farnesyl diphosphate synthase
LI99_26000
Prenyltransferases [BR:
msn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LI99_26000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prenyltransf
Motif
Other DBs
NCBI-ProteinID:
AIU16914
UniProt:
A0A8B4R003
LinkDB
All DBs
Position
complement(5349184..5349975)
Genome browser
AA seq
263 aa
AA seq
DB search
MDIIPPRLKEPAYRIYEMRLRHELVRSKAQLPRHIAVLCDGNRRWARDAGYDDVSIGYRK
GAAKIAEMLRWCQAAGIEMATIYLLSTENLQRDPDELTALIEIITDVVEEICAPYNKWSV
RTVGDLELLGDEPARRLREAVESTTTKGANFHVNVAVAYGGRQEIVDAVRSLLSKELANG
ATAEQLIEAVTVDGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYWP
AFRRVDFLRALRDYTARHRRFGK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtggacatcattcccccgcgtctcaaagaaccggcctaccggatctacgagatgcggttg
cgccacgaattggtgcggtccaaagcccaactgccacggcacatcgcggtgctgtgtgac
ggaaatcgccgctgggcgcgtgacgcaggttacgacgacgtcagcatcggctaccgcaaa
ggggcggcaaagatcgccgagatgctgcgctggtgtcaggccgccgggatcgagatggcc
acgatctacctgttgtctaccgagaacctgcagcgcgatcccgacgaactcaccgcgctc
atcgagatcatcaccgacgtcgtcgaggagatctgcgcgccgtacaacaaatggagcgtg
cgtaccgtcggcgacctcgaactgctgggcgacgaaccggcgcgccggctgcgcgaggcc
gtcgagagcaccacgaccaaaggcgccaacttccacgtcaacgtcgccgtcgcctacggc
ggacgccaggagatcgtcgacgcggtccgctcgctgctgtccaaggaactcgccaacggc
gccacggccgaacagctcatcgaggccgtcacggtcgacggcatctccgagaacctctac
acctcgggtcagccggaccccgacctggtgatccgcacctcgggggagcagcggctcagc
ggtttcctgctgtggcagagcgcctattcggagatgtggttcaccgaggcgtactggccc
gcgttccgccgggtcgacttcctgcgcgcgctgcgcgactacaccgcaaggcaccggcgc
ttcggcaagtag
DBGET
integrated database retrieval system