Mycolicibacterium gilvum Spyr1: Mspyr1_29070
Help
Entry
Mspyr1_29070 CDS
T01376
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
msp
Mycolicibacterium gilvum Spyr1
Pathway
msp03030
DNA replication
msp03410
Base excision repair
msp03420
Nucleotide excision repair
msp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mspyr1_29070
03410 Base excision repair
Mspyr1_29070
03420 Nucleotide excision repair
Mspyr1_29070
03440 Homologous recombination
Mspyr1_29070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msp03032
]
Mspyr1_29070
03400 DNA repair and recombination proteins [BR:
msp03400
]
Mspyr1_29070
Enzymes [BR:
msp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mspyr1_29070
DNA replication proteins [BR:
msp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mspyr1_29070
DNA repair and recombination proteins [BR:
msp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Mspyr1_29070
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mspyr1_29070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
Peptidase_C93
DNA_pol_lambd_f
NYN_YacP
HHH_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADT99527
UniProt:
E6TAE6
LinkDB
All DBs
Position
complement(3017083..3019809)
Genome browser
AA seq
908 aa
AA seq
DB search
MSPAKTASKKAATPAADDTPTLMLLDGNSLAFRAFYALPAENFKTQGGLTTNAVYGFTAM
LINLIRDEQPSHIAAAFDVSRQTFRKEKYPEYKEGRSATPDEFRGQIDITKEVLGALGIT
VLAEAGFEADDIIATLATQAEGEGHRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFT
PEAVQEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWIAEYGSLQGLVDNVDKV
KGKVGDALRAHLSSVVLNRELTELVKDVPLAQTPDTLRMQPWDRDHIHRLFDDLEFRVLR
DRLFDTLASADPEVEEGFDVQGEALQAGTLAPWLAENSDGRRFGLAVVGNHLAFDSDATA
LTIVASGGEGRYIDTTGLDPDDEKALASWLADPHVPKALHEAKLAIHDLQGRGWTLAGVT
SDTALAAYLVRPGQRSFALDDLSLRYLKRELRADNPEQQQLSLLDDSDGVDDQAVQTLLL
RASAVVDLADALDEELSRIDSSALLGNMELPVQRVLAELETAGIAVDLEMLSGLQSEFAD
QIRDAAEAAYAVIGKQINLGSPKQLQVVLFDELEMPKTKRTKTGYTTDADALQSLFDKTG
HPFLQHLLAHRDATRLKVTVDGLLNAVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIR
TEAGRRIRDAFVVGDGYGELMTADYSQIEMRIMAHLSRDEGLIEAFNTGEDLHSFVASRA
FSVPIDEVTAELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEAKEQMEQYFARFGGVRDY
LRDVVDQARKDGYTSTVFGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI
NVDQAIKDAGLKSRTLLQVHDELLFEVADGERDTLDALVREHMGSAYALDVPLEVSVGFG
RSWDAAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccagccaagaccgcctcgaagaaggccgccacaccggccgccgacgacacgccg
acgctgatgctgctcgacggcaactcgctggccttccgggcgttctacgcgctgcctgcg
gagaacttcaagacccagggcgggctgaccaccaacgccgtgtacggcttcaccgcgatg
ctcatcaacctcatccgcgacgagcagcccagccacatcgcggccgcgttcgatgtctcc
cgccagaccttccgcaaggagaagtaccccgagtacaaggaaggccggtcggcgacgccc
gacgagttccgcggccagatcgacatcaccaaagaggtcctcggtgcgctcggcatcacg
gtgctcgccgaggccggcttcgaggccgacgacatcatcgccacgctggcgacgcaggcc
gagggcgaggggcaccgcgtcctggtggtcaccggtgatcgcgacgcgctgcaactggtc
agcgacgacgtcaccgtgctttacccccgcaagggagtcagcgagctgacccgcttcacg
ccggaggcggttcaggagaagtacgggctcacgcccgcgcagtacccggatttcgccgcg
ctgcgcggcgaccccagcgacaacctgccgggcatcccgggcgtgggggagaagaccgcc
accaagtggatcgccgaatacgggtcgttgcaggggctggtcgacaacgtcgacaaggtc
aagggcaaggtcggcgatgcgttgcgcgcgcacctgtcctcggtggtgctcaaccgtgag
ctcaccgagctggtgaaggacgtgccgctcgcccagaccccggacacgctacgcatgcag
ccctgggatcgcgaccacatccaccggctcttcgacgatctcgagttccgtgtcctgcgt
gaccggctcttcgacaccctcgcctccgccgatccggaggtcgaggaaggcttcgacgtc
cagggcgaggcgctgcaggccgggacgctggcgccgtggctggccgagaacagcgacggt
agacggttcgggctggccgtcgtcggcaaccatctcgccttcgacagcgacgcgaccgcg
ctgaccatcgtggcctccggcggcgagggccgctacatcgacaccaccgggctcgatccc
gacgacgagaaggcgctggcctcctggctggccgacccgcacgtgcccaaggcgctgcat
gaggccaagcttgcgatccacgatctgcagggcaggggctggacgctggccggcgtcacc
tccgacaccgcgctggccgcgtacctggtccgcccgggacagcgcagcttcgccctcgac
gacctgtcgctgcgctacctcaagcgcgaactacgcgccgacaaccctgagcagcaacaa
ctttcgctcctcgatgacagtgacggcgtcgacgaccaggccgtgcagacgctgctgttg
cgtgccagcgcggtggtcgacctcgccgacgccctcgacgaggaactctcgcgcatcgac
tcctcggcgttgctgggcaacatggaactcccggtgcagcgggtgctggcagagctcgaa
accgcaggcatcgccgtcgatctggagatgctctccggcctgcagagcgagttcgcggac
cagatccgcgacgccgccgaggcggcctacgccgtgatcggcaagcagatcaacctcggc
tccccgaaacagctgcaggtggtcctgttcgacgagctcgagatgccgaagaccaaacgc
accaagaccggctacaccaccgacgcggatgcgctgcagagtctcttcgacaagaccgga
catccgttcctgcagcatctgctggcccaccgcgacgcgacgcggctgaaggtgacggtc
gacggcctgctcaacgcggtggcctccgacgggcggatccatacgacgttcaaccagacg
atcgcggcgacgggccggttgtcgtccaccgagccgaacctgcagaacatcccgatccgc
accgaagccggccgccggatccgcgacgcgttcgtggtgggtgacggctacggcgagttg
atgaccgccgattacagccagatcgagatgcgcatcatggcgcacctgtcccgtgacgag
ggcctgatcgaggcgttcaacaccggcgaggatctgcactcgttcgtcgcgtcgcgggcc
ttctcggtgccgatcgacgaggtcaccgccgaactgcggcggcgggtcaaggcgatgtcc
tacggcctggcctacgggctcagcgcctacgggttgtcccagcagctcaagatctcgacc
gaagaggccaaagagcagatggagcagtacttcgcgcgattcggcggggtgcgcgactat
ctgcgcgacgtcgtggaccaggcccgtaaagacggttacacgtcgacggtgttcggtcgc
aggcgttacctccccgaactcgacagcagcaaccggcaggtgcgggaggccgccgaacgg
gcagcgctcaacgcgccgatccagggcagtgccgccgacatcatcaaggtcgcgatgatc
aacgtcgaccaggcgatcaaggacgcggggctgaagtcccgcacgctgctgcaggtgcac
gacgaactcctcttcgaagtcgccgacggcgagcgtgacaccctcgacgccctggtgcgc
gagcatatgggctccgcatacgccctcgacgtgccgttggaggtgtctgtcggcttcggg
cgcagttgggacgcggccgcgcactga
DBGET
integrated database retrieval system
