Mycolicibacterium gilvum Spyr1: Mspyr1_48870
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Entry
Mspyr1_48870 CDS
T01376
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msp
Mycolicibacterium gilvum Spyr1
Pathway
msp03030
DNA replication
msp03430
Mismatch repair
msp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mspyr1_48870
03430 Mismatch repair
Mspyr1_48870
03440 Homologous recombination
Mspyr1_48870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msp03032
]
Mspyr1_48870
03400 DNA repair and recombination proteins [BR:
msp03400
]
Mspyr1_48870
Enzymes [BR:
msp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mspyr1_48870
DNA replication proteins [BR:
msp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mspyr1_48870
DNA repair and recombination proteins [BR:
msp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mspyr1_48870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ADU01425
UniProt:
E6TJM9
LinkDB
All DBs
Position
complement(5075377..5076378)
Genome browser
AA seq
333 aa
AA seq
DB search
MSSTAGRRWGRPAHEDGAGWAVVDVETSGFRPGQARIVSVAALALSDDGNVEKSLYSLLD
PGVDPGPTHVHGLTAEMLEGQPTFGDVVGDLCEVLRGRTLVAHNVGFDYSFLSAEAELVG
AELPIDTVMCTVELARRLDLGLENLRLETLAAHWGVTQMRPHDALDDAMVLAQILKPVLV
RAQERRKWLPVHPVGRRTWPNGRVTHDEFRPLKALAARMACPYANPGRFVSGRPLVQGMR
VALAAEVGHTYDELIERIVHAGLAYTESVDAFTSLVVCDAAAPEQGKGYQAGEFGVPMLP
SDEFLQRLDAVIGGSAVEEFAEPSPAGDQFALF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaaccgccggacgtcgctggggcaggcccgcccacgaggacggcgcgggttgg
gcggtggtcgacgtcgagacctcgggtttccgccccggccaggcgcgcatcgtcagcgtc
gcggcgctggcgctgtccgacgacggcaacgtcgagaagagcctgtacagcctgctcgat
cccggcgtggatcccggccccacccacgtgcacggtctgaccgccgagatgctggagggc
cagccgacgttcggtgacgtcgtcggcgacctgtgcgaggtcctgcgcggccgcaccctg
gtggcccacaacgtcggcttcgactactcgttcctgtccgccgaagccgagctggtcggc
gccgagctgccgatcgacacggtcatgtgcacggtcgagctggcgcgccgcctcgacctg
gggctggagaacctgcgtctggagaccctggccgcgcactggggcgtcacgcagatgagg
ccgcacgacgcgctcgacgacgcgatggtgctggcccagatcctcaagccggtgttggtg
cgcgcccaggagcgccgcaagtggctgcccgtgcatccggtgggacggcgcacctggccg
aacggccgggtcacccacgacgagttccgtccgctgaaggcactggccgccagaatggcg
tgcccttacgccaaccccggccggttcgtgtccggcaggccgctggtccagggcatgcgg
gtcgcgctggccgccgaggtcggccacacctacgacgagctcatcgaacgcatcgtgcat
gccggcctcgcctacaccgagtcggtcgacgcgttcacctcgctcgtggtgtgcgacgca
gccgcacccgaacagggcaagggctatcaggccggcgagttcggcgtaccgatgctgccg
agcgacgagttcctgcagcgcctggacgcggtgatcggcggctcggccgtcgaggagttc
gccgaaccgtccccggccggggatcagttcgcgctcttttag
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