Mycoplasmopsis synoviae 53: MS53_0455
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Entry
MS53_0455 CDS
T00261
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
msy
Mycoplasmopsis synoviae 53
Brite
KEGG Orthology (KO) [BR:
msy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MS53_0455 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msy03021
]
MS53_0455 (rpoD)
Transcription machinery [BR:
msy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MS53_0455 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AAZ43865
LNCC_Brazil:
MS0455
UniProt:
Q4A5V6
LinkDB
All DBs
Position
515722..518118
Genome browser
AA seq
798 aa
AA seq
DB search
MATPKKAKLSTTSKVKTESKKVVAKKAPAPNARVKAEPKKELKTVSKAKTTKVTPKKVEV
KKAAPVKKVASKKVEKSSSKKAAPVAKTKAVKKAPAVKVEKKVAASKAKVSETQTKKVAV
KKPAASTKVKTTKKAVVKKEVKPATKAKSTKAATTKAVAAKKVEVKKVETKKAVKPAVKK
AAPAAKAKVEAKEKSKAKVASTTTKKVATKASAKTAKVEKKAAPVKASVTKKVAPKKEEK
KTKTTTKKKQLKTKTTKTQAKNSTLNTKTSAKPKTKEIKKASKASVFTSAKAQENEELSD
KEISYNLILDQLKKSKPHQKKWKVEEVLEFIERKKLDIEEEVVDELFDFFAQKNLFKADE
NIVSSEKDLKEEFEEELKAEKKSKSAKDLKLNFNADFDDDLLDEDDSPLFDSDDDEEFDD
DFIEDEEVDVNLEEYDHDEEDEEEDEKLEEDDELDFSLVASDDDLDELDLDNFSPDEIDL
QIDEENKKQDLSNKLTETTDIVKWYMRWIGKYGKLLTPQEEKDLAEEMDKGGSRGKRARD
LIIKRNLRLVVNAAKKYKNRGLSFIDLVSEGNAGLLKAAQKFDIKKGFKFSTYATWWIRQ
SISRAVADQARIIRVPVHMVETINKIYKIEREIQQENGGEIIDEEIAARLGGKSKKYDAS
YIRYIRKINTSPISLDKQVGKENDSFFGDFVKDESIISPVEFADKEELITKINYYVEKLL
SEAEADLIKRYHGIGYDAKGNPVRSATLDEISKDFRGEGKKISKERVRQIITKIYKKLRG
YPEVVELFENFIKFKNED
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaccaaagaaagctaaattaagtactacttcaaaagtaaaaacagaatcaaaa
aaagttgtagctaaaaaagctccagctccaaatgcaagggttaaagcagaacctaaaaaa
gaattaaagactgtttcaaaagcaaaaacaactaaagttactcctaaaaaagtagaagtt
aaaaaagctgcgcctgttaaaaaagttgcaagtaaaaaagtagaaaaatcttctagtaaa
aaagctgctcctgtagctaaaacaaaagcagttaaaaaagctcctgcagttaaagtagaa
aaaaaagttgcagcatcaaaagcaaaagttagcgaaacccaaactaaaaaagtagcagtt
aaaaaaccagctgctagcacaaaagtaaaaacaacaaaaaaagcagtagttaaaaaagaa
gttaaacctgcaactaaagctaaatcaacaaaagcagctactactaaagcagtagctgct
aaaaaagtagaagttaaaaaagttgaaactaaaaaagctgtaaaacctgctgttaaaaaa
gctgcaccagctgctaaagctaaagtagaagcaaaagaaaaatcaaaggctaaagtggct
tctacaacaacaaaaaaagtagcaactaaagcttctgcaaaaactgctaaggtagaaaaa
aaagcagctccagttaaagctagcgtaacaaaaaaagtagctcctaaaaaagaagaaaaa
aaaactaaaactactacaaaaaaaaagcaactaaaaactaaaacaactaaaactcaggca
aaaaacagcactttaaacactaaaacatctgcaaaaccgaaaacaaaagaaataaagaaa
gctagcaaagcttctgtttttacatctgcaaaagcacaagaaaatgaagaactttcagat
aaagaaattagctataacttaattttagatcagctgaaaaaaagtaagccacatcagaaa
aaatgaaaagttgaagaagttttagaattcattgaaagaaaaaaacttgacattgaagaa
gaagtagttgatgagctatttgacttctttgcgcaaaagaatttatttaaagctgatgaa
aatatagtatcttcagaaaaagatttaaaggaagagtttgaagaagaactaaaggcagaa
aaaaaatctaaaagtgctaaagatttaaaattaaattttaacgcagattttgatgatgat
ttattagatgaagacgattcaccactttttgattctgatgatgacgaagaatttgatgat
gattttatcgaagatgaagaagtcgatgttaatctagaagaatacgatcacgacgaagaa
gacgaagaagaagatgaaaaattagaagaagatgacgaacttgatttttcattagtagcc
tctgatgatgatctagatgaacttgatttagataacttttcacctgatgaaattgatctt
caaattgatgaagaaaacaagaaacaagatctttcaaataaactaaccgaaacaaccgat
atcgttaaatgatacatgcgttgaatcggtaagtatggaaaacttttaactcctcaagaa
gaaaaagatttagctgaagaaatggacaaaggtggttcaagaggaaaaagagctagagat
ctaattattaaaagaaaccttcgtttagtagttaacgctgctaaaaaatacaaaaataga
ggacttagctttattgatttagtttctgaaggtaatgccggtttattaaaagctgcacaa
aaatttgacatcaaaaaaggatttaaattctcaacatatgcaacttgatgaataagacaa
tctatttctagagctgttgccgatcaagctagaattattagagtgcctgttcatatggtt
gaaaccattaataagatttataaaatcgaaagagaaatccaacaagaaaatggtggtgaa
ataatcgatgaagaaatcgcagcaagacttggtggaaaaagcaaaaaatatgatgcatca
tatattagatacattagaaaaataaacacaagtcctatttcattagataaacaagtcgga
aaagaaaacgattcattctttggagactttgttaaagatgaaagcattattagccctgtt
gaatttgccgataaagaagaactaattaccaaaattaattactacgtagaaaaacttctt
agcgaagctgaagctgatttaattaaaagatatcacggaatcggttacgatgcaaaaggt
aatccagtaagatcagctactcttgatgaaatttcaaaagacttccgcggtgaaggtaag
aaaatttctaaagaaagagttcgtcaaataattactaaaatttacaaaaaactaagagga
tatcctgaagttgttgagttatttgaaaacttcataaaatttaaaaatgaagattaa
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