Mycobacterium tuberculosis CCDC5079: CCDC5079_0168
Help
Entry
CCDC5079_0168 CDS
T01991
Name
(GenBank) RNA polymerase factor sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mte
Mycobacterium tuberculosis CCDC5079
Brite
KEGG Orthology (KO) [BR:
mte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mte03021
]
CCDC5079_0168
Transcription machinery [BR:
mte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCDC5079_0168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
Sigma70_r4
SnoaL_4
NTF2
SnoaL_3
Motif
Other DBs
NCBI-ProteinID:
AEJ45358
LinkDB
All DBs
Position
complement(210654..211652)
Genome browser
AA seq
332 aa
AA seq
DB search
MSVLAENSGREPADERRGDFSAHTEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAY
EGFAGKSSLRTWLHRIATNTCLTALEGRRRRPLPTGLGRPSADPSGELVERREVSWLEPL
PDVTDDPADPSTIVGNRESVRLAFVAALQHLSPRQRAVLLLRDVLQWKSAEVADAIGTST
VAVNSLLQRARSQLQTVRPSAADRLSAPDSPEAQDLLARYIAAFEAYDIDRLVELFTAEA
IWEMPPYTDWYQGAQAIVTLIHQQCPAYSPGDMRLISLIANGQPAAAMYMRAGYVHLPFQ
LHVLDMAADRVSHVVAFLDTTLFPKFGLPDSL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtgctcgcagaaaactctggccgcgagcccgccgacgaacggcgcggggacttc
tccgcccacaccgagccctaccggcgtgaactgctcgcacactgctatcgcatgactggc
tcgctgcacgacgcggaagaccttgttcaggagacgctgctgcgggcctggaaggcctat
gagggcttcgcgggcaagtcctcgctacgcacctggctgcatcggatcgccaccaacacc
tgcctgacggcgttggagggccgtcgacgccggccgttgccgacggggctcgggcggccg
agtgccgatccgtccggggagttggtggaacgtcgagaggtgtcctggctggagccgctg
ccggacgtgacggacgaccctgctgatccctcaacgatcgtcgggaaccgggaatcggtg
cggttggcctttgtggcggctctgcagcacctctcaccccggcagcgagccgtactgctg
ctgcgcgacgtgctgcagtggaaatcggccgaggtggccgacgcgatcggtaccagcacc
gtcgccgtcaatagcctgctgcagcgggcccgctctcagctgcagacggtccggcccagc
gccgccgaccggttgtccgcgccggattcacccgaggcgcaagacctgttggcccgctat
atcgccgcgttcgaggcttatgacatcgaccggttggtcgagctgttcaccgccgaggcg
atctgggaaatgccgccgtataccgactggtaccagggcgcacaggccatcgtcaccctc
attcaccaacagtgccccgcctattcgcctggcgatatgcgcctgatttcgttgatcgcc
aacggccagcccgccgcggccatgtacatgcgtgccggttacgtgcacctgccttttcag
ctacacgtgctggacatggccgccgaccgcgtgtcacacgtggtggccttcctcgacacc
accttgttcccgaaattcggcctgcccgattcgctgtga
DBGET
integrated database retrieval system
