Mycobacterium tuberculosis CCDC5079: CCDC5079_2315
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Entry
CCDC5079_2315 CDS
T01991
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mte
Mycobacterium tuberculosis CCDC5079
Brite
KEGG Orthology (KO) [BR:
mte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mte03019
]
CCDC5079_2315
03009 Ribosome biogenesis [BR:
mte03009
]
CCDC5079_2315
Messenger RNA biogenesis [BR:
mte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CCDC5079_2315
Ribosome biogenesis [BR:
mte03009
]
Eukaryotic type
Pre-60S particles
RNases
CCDC5079_2315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AEJ47505
LinkDB
All DBs
Position
2808957..2809604
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AA seq
215 aa
AA seq
DB search
MQDELVWIDCEMTGLDLGSDKLIEIAALVTDADLNILGDGVDVVMHADDAALSGMIDVVA
EMHSRSGLIDEVKASTVDLATAEAMVLDYINEHVKQPKTAPLAGNSIATDRAFIARDMPT
LDSFLHYRMIDVSSIKELCRRWYPRIYFGQPPKGLTHRALADIHESIRELRFYRRTAFVP
QPGPSTSEIAAVVAELSDGAGAQEETDSAEAPQSG
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagacgaactggtgtggatcgactgcgagatgaccgggctcgatctgggttcggac
aagctgatcgagatagccgccctggtcaccgatgccgatctgaacattctcggcgacggg
gtggacgtggtgatgcacgccgacgacgccgcgctgtcgggcatgatcgacgtggtcgcc
gagatgcactcgcggtcggggctgatcgacgaggtgaaggcatccacggtcgacctagcg
accgccgaggccatggtgctcgactacatcaacgagcacgtcaagcagcccaagaccgcc
ccactggccggcaactcgatcgccaccgaccgcgcgttcatcgcccgcgacatgcccacg
ctggactcgtttctgcactaccgaatgatcgacgtcagctcgatcaaggaactgtgccgg
cgctggtatccgcggatctacttcggccagccgcccaaggggctgacgcaccgggcgctg
gccgacatccacgaatccatccgcgaactgcggttctaccgccgcaccgcgttcgtgccc
cagcccggcccttctaccagcgaaatcgcggccgtcgtcgccgagctttccgacggggcg
ggcgcgcaggaagaaacagattcggccgaggcgccccagagcggttaa
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