Micromonospora terminaliae: GCE86_27785
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Entry
GCE86_27785 CDS
T06293
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mtem
Micromonospora terminaliae
Brite
KEGG Orthology (KO) [BR:
mtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtem03032
]
GCE86_27785 (topA)
03400 DNA repair and recombination proteins [BR:
mtem03400
]
GCE86_27785 (topA)
Enzymes [BR:
mtem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GCE86_27785 (topA)
DNA replication proteins [BR:
mtem03032
]
Prokaryotic type
DNA Topoisomerases
GCE86_27785 (topA)
DNA repair and recombination proteins [BR:
mtem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GCE86_27785 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MarR_2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QGL50487
UniProt:
A0A6I5UKT3
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All DBs
Position
5990816..5993644
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AA seq
942 aa
AA seq
DB search
MPSNAGTTRLVIVESPAKAKTISGYLGPGYVVEASFGHVRDLPRNAAEIPAAYEDKPWAR
LGVDVDNGFAALYVVSADRKKQITKLKSLAKEVDEIFLATDEDREGEAIAWHLVETLKPK
VPVKRMVFHEITKPAIQAAVANPREIDRDLVDAQEARRILDRLYGYEVSPVLWRKVRSGL
SAGRVQSVATRIVVERERQRMAFRTAEYWDILATLAVANPGEGPRTFNATLIALNGDRIA
TGKDFEPTTGRVRAGAGVVHLDESGARGLAARLDGRPFTVTRVEEKPYRRRPYAPFITST
LQQEAARKLRFSSQQTMRTAQRLYENGYITYMRTDSVNLSETAISAARRQIAELYGERSV
PPEPRRYTGKVKNAQEAHEAIRPAGDNFRTPGEVAKELSAEEFKLYELIWRRTIASQMTD
AVGSSVSVRIRALSNAGEEADFGATGKTITDPGFLRAYVESSDDENAEAEDAERRLPTLT
KDQPLTADELAPQGHHTQPPARYTEASLVKALEELGIGRPSTYASIMQTIQDRGYVFKRG
QAMIPSFLAFAVIGLLERHYPRLIDYDFTASMENELDEIAGGDHAAVDFLTSFYFGSANG
TGDQAIAHAGGLKKLVTENLSEIDARSVNSIPLFTEDDGREVVVRVGRYGPYLQRTMPGE
QPAPPAEGEEGGGQGDRAPIPEGLAPDELTPEKVHELFLGGGGERKLGDDPATGEPILLK
SGRFGPYVASGDRKSSLLRSQSPDSLTLDQALRLLSLPRLIGTDPEGNEVVANNGRYGPY
VKRGDEFRSLDSEDKMFTVTLDEALALLAAPKTRQRRAAAPPLREMGNDPLTEKPLVIKD
GRFGPYVTDGETNASLRRAQTPEALTLEEASEMLAEKRAKGPAPKKKAAKKAAPAKKATA
TKKTAAAAKSTATKKTTTAKATAAKKAPAKKAAPKKATTSPE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagcaacgctggaaccacccgtctggtcatcgtcgagtcaccggcgaaggccaag
acgatctcgggctacctcggcccggggtacgtcgtggaggccagcttcggccatgtccgg
gacctgccccgcaacgccgccgagatcccggccgcctacgaggacaagccctgggcccgg
ctcggcgtggacgtggacaacggcttcgccgccctctacgtggtctccgccgaccggaag
aagcagatcaccaagctgaagtcgctggccaaggaggtggacgagatcttcctcgccacc
gacgaggaccgcgagggcgaggcgatcgcgtggcacctcgtggagacgctgaagcccaag
gtgccggtcaagcggatggtgttccacgagatcaccaagccggccatccaggccgcggtg
gccaacccccgggagatcgaccgggacctggtcgacgcccaggaggcccggcgcatcctc
gaccggctctacggctacgaggtctccccggtgctctggcgcaaggtccgcagcggcctc
tccgccggccgggtgcagtccgtggcgacccggatcgtggtcgagcgggagcggcagcgg
atggcgttccgcaccgccgagtactgggacatcctggccaccctggcggtcgcgaacccg
ggcgagggcccgcgcaccttcaacgccaccctgatcgcgctgaacggcgaccggatcgcc
accggcaaggacttcgagcccaccacgggccgggtccgggccggcgccggcgtggtgcac
ctggacgagagcggtgcccgcgggctggccgcgcggctggacgggcggccgttcacggtc
acccgggtcgaggagaagccctaccgccgccgcccgtacgcgccgttcatcacctcgacc
ctccagcaggaggcggcccgcaagctgcggttctcgtcgcagcagacgatgcgcaccgcg
cagcggctctacgagaacggctacatcacctacatgcgtaccgactcggtgaacctgtcg
gagaccgccatctcggcggcccgccggcagatcgccgagctctacggcgagcgcagcgtg
ccgccggagccgcgccgctacaccggcaaggtgaagaacgcgcaggaggcgcacgaggcg
atccgcccggcgggggacaacttccgcaccccgggcgaggtggccaaggagctgtccgcc
gaggagttcaagctctacgagctgatctggcggcgcaccatcgcctcgcagatgaccgac
gcggtcggctccagcgtgtcggtgcgcatccgggcgctctccaacgccggggaggaggcc
gacttcggggccaccggcaagaccatcaccgaccccggcttcctgcgggcgtacgtcgag
tcgagcgacgacgagaacgccgaggccgaggacgccgagcggcggctgcccaccctcacc
aaggaccagccgctcaccgccgacgagctggccccccagggccaccacacccagccgccc
gcccgctacaccgaggcgtcgctggtcaaggccctggaggagctgggcatcggccgcccg
tcgacgtacgcgtcgatcatgcagaccatccaggaccgcgggtacgtcttcaagcgcggc
caggccatgatcccgtcgttcctggcgttcgcggtgatcgggctgctggagcggcactac
ccgcgcctcatcgactacgacttcacggccagcatggagaacgagctggacgagatcgcc
ggcggtgaccacgcggcggtcgacttcctcacctccttctacttcggcagcgccaacggc
accggcgaccaggccatcgcccacgcgggcgggctgaagaagctggtcaccgagaacctc
agcgagatcgacgcgcgcagcgtcaactcgatcccgctgttcaccgaggacgacgggcgc
gaggtcgtcgtgcgggtgggccgctacgggccgtacctccagcggacgatgcccggcgag
cagcccgcgccccccgccgagggcgaggagggcggcggccagggcgaccgggcgccgatc
cccgaggggctggcccccgacgagctgaccccggagaaggtgcacgagctgttcctcggc
ggcgggggcgagcgcaagctcggcgacgacccggccaccggcgagccgatcctgctcaag
tccggccggttcggcccctacgtggccagcggcgatcggaagtcctcgctgctgcgctcg
cagtcgccggacagcctcaccctcgaccaggcgctgcggctgctcagcctgccccggctc
atcggcaccgaccccgagggcaacgaggtggtcgccaacaacggccgctacggcccctac
gtcaagcgcggtgacgagttccgctcgctggactcggaagacaagatgttcaccgtcacg
ctggacgaggcgctcgccctgctggccgccccgaagacccggcagcgccgggccgccgcg
ccgcccctgcgggagatgggcaacgacccgctcaccgagaagccgctggtgatcaaggac
gggcgcttcggcccgtacgtgacggacggggagaccaacgcctcgctgcggcgggcgcag
accccggaggcgctgaccctcgaggaggcctccgagatgctcgccgagaagcgggcgaag
ggtccggcgccgaagaagaaggcggcgaagaaggccgccccggccaagaaggcgacggcg
accaagaagaccgccgccgcggccaagtccacggccaccaagaagaccacgacagccaag
gccacagcggcaaagaaggcgccagccaaaaaggcagccccgaagaaggcgaccacctcg
ccggagtag
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