Macaca thibetana thibetana (Pere David's macaque): 126962114
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Entry
126962114 CDS
T08579
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
126962114
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mthb00536
]
126962114
Glycosaminoglycan binding proteins [BR:
mthb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126962114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
126962114
NCBI-ProteinID:
XP_050658918
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Position
9:complement(63503081..63593178)
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AA seq
553 aa
AA seq
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MPGRVGVKGQPGEKGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGD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NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgcctggacgtgtgggagtaaagggccaaccaggcgagaaggggtcccccggagatgct
gggctgtccatcatcggcccccgcggcccccctggtcaaccaggcactcgaggttttcct
ggatttccgggtcccattgggctggatggcaaaccgggccacccaggaccaaagggcgac
atgggtctgacgggtcccccaggacagccgggacctcagggacaaaaaggagaaaagggt
cagtgtggagagtacccacaccggctgctgcctctcctcaattcagtgcgactggctcca
cccccggtcataaaaaggcggacattccagggtgaacagagccaagccagcatccaaggt
ccaccagggcccccaggcccccctggaccaagtggacctctggggcacccaggactacca
gggcccatggggccacccggcttacctgggcctcctggaccaaagggagacccagggatc
cagggctaccacggccggaagggagaacggggcatgccagggatgcccggcaagcatgga
gccaagggcactcctggaattgccgtggctgggatgaagggcgagccagggatcccagga
accaagggtgagaagggggctgaaggctcccctgggcttcctggcctcctggggcagaag
ggagagaaaggcgatgctggcaactccattggaggaggcagaggggaacccggccctcca
gggctccctggacccccagggccaaagggagaagcgggtgtcgatggccaggtcggcccc
ccagggcagcaaggagacaagggggagcctggagcagctggagaacagggaccagctggc
cccaagggctccaagggagaaccagggaaaggagagatggtggattacaatggaaacatc
aatgaggctctccaggagatccggacactggccttgatggggcctcctggtcttcctggg
caaattggcccacctggagctccagggattccaggccagaagggggagattggactgcca
ggccctccaggacacgatggggagaagggacctcgcggtaaaccaggagacatgggccct
cctggtccccaaggccccccaggaaaggatggacctccaggaatgaaaggagaaaacggg
cacccagggagcccaggagaaaagggagagaaaggagagacaggacaagcaggctcgccg
ggagagaaaggagaagccggggagaagggcgatccaggagcagaggggctccaaggtgtt
cctggaccaaagggggaagcaggactagatggagcaaaaggagagaaaggcatccaggga
gaaaaaggagaccgtggtcccctgggactacccggagcttcaggtttggacggcaggcct
gggccaccgggtactccaggaccaattggagttccaggcccagcaggaccaaagggcgag
aggggcagcaaaggagaccctgggatgacaggaccaacgggagcagctgggcttcctggt
ttacatggaccacccggggacaagggaaaccggggggagagggggaagaaaggctctaga
gggcctaaaggggataagggagaccaaggagcgcctggattagatgccccctgcccgttg
ggcgaagatggcttgccagtccaaggctgctggaacaagtga
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