Mixta theicola: C7M52_02966
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Entry
C7M52_02966 CDS
T06402
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mthi
Mixta theicola
Pathway
mthi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mthi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7M52_02966 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthi03019
]
C7M52_02966 (deaD)
03009 Ribosome biogenesis [BR:
mthi03009
]
C7M52_02966 (deaD)
Enzymes [BR:
mthi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C7M52_02966 (deaD)
Messenger RNA biogenesis [BR:
mthi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C7M52_02966 (deaD)
Ribosome biogenesis [BR:
mthi03009
]
Prokaryotic type
rRNA helicases
C7M52_02966 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_C
CMS1
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHM76979
LinkDB
All DBs
Position
complement(3313320..3315206)
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AA seq
628 aa
AA seq
DB search
MTDIQTTFSDLGLNEAILTALNDMGYEKPSPIQAACIPHLLAGRDVLGMAQTGSGKTAAF
ALPLLNNIDSELKAPQILVLAPTRELAVQVAEACNDFSKHMRGVNVLALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSNLRGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWTVWGRKTDALVRFLE
AEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIA
TDVAARGLDVDRISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIE
RTMKLTIPEVELPNAELLSTRRLAKFAAKVQQQLESSDLEQYRALLSQLTPESDLDMETL
AAALLKMAQGERPLILPPDAPRPQRREFRERDDRRGSREVRSDSRDGDRPRRERRDVGDM
ELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGEILQHFT
RTRILNKPMNMQLLGDAQPHERSDRGERRGGGRSGFGGGERREGGREGGRRFSERREGGG
RSFNREGANRGPRREDSAGTGAVRRRDY
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgactgatatccaaaccactttttccgatctgggccttaacgaagctatcctcaccgct
ctgaatgacatgggctatgagaagccgtcgcccatccaggccgcctgtatcccgcatctg
ctggcaggccgcgatgtgctgggtatggcgcaaaccggtagtggcaaaaccgcagctttc
gccttaccgctgctgaacaacattgacagcgaattgaaagcgccgcagatcctggtgctg
gcgccgacgcgtgagctggcggtgcaggttgcagaagcctgcaacgatttctccaaacat
atgcgcggcgtaaacgtgctggccctgtatggcggccagcgttatgacgtgcagctgcgt
gcgctgcgtcaggggccgcaaatcgtagtaggtacgcctggccgtctgctggaccacctg
aaacgcggcacgctggatctctccaacctgcgcggtctggtgctcgacgaagcggatgag
atgctgcgcatgggctttatcgaagacgtggaaaccatcatggcgcagatcccggaaggt
catcagaccgctctgttctctgccaccatgccggaagcgattcgtcgcattacccgtcgc
tttatgaaagatccgcaggaagtacgtatccagagcagcgttaccacgcgtcctgacatc
agccagagctactggaccgtctggggccgtaaaaccgacgcgctggtgcgtttcctggaa
gcggaagactttgatgccgccattatcttcgttcgcaccaaaaatgcgacgctggaagtg
gctgaagcgctggagcgcagcggctataacagcgccgcgctgaacggcgatatgaaccag
gcgctgcgcgagcagacgctggagcgtttgaaagatggtcgtctggatatcctgatcgcg
actgacgttgccgctcgtggccttgacgtcgatcgtatcagcctggtggttaactacgat
atcccgatggattcggaatcctacgttcaccgtattggccgtaccggtcgcgccggtcgc
gccggtcgcgcgctgctgttcgtggaaaaccgcgagcgccgtctgctgcgcaatatcgaa
cgcaccatgaagctgaccattccggaagtggaactgccgaacgcggaactgctgagcacc
cgccgtctggcgaagttcgccgctaaagtacagcagcagctggaaagcagcgatctggaa
cagtaccgcgcgctgctgagccagctgacgccggaaagcgatctggatatggaaacgctg
gccgccgcgctgctgaaaatggcgcagggcgaacgtccgctgattctgccgccggatgcg
ccgcgtccgcagcgtcgtgaattccgtgagcgtgacgatcgtcgcggcagccgtgaagta
cgtagcgacagccgcgatggcgatcgtccacgtcgtgaacgtcgtgacgttggcgatatg
gaactgtaccgcattgaagtgggtcgcgatgatggtgttgaagtgcgtcacatcgtgggc
gctatcgccaacgaaggcgatatcagcagccgttacatcggcaacatcaagctgtttgct
tctcactcaacgattgagctgccgaaaggtatgccgggcgaaatcctgcagcactttacc
cgcacgcgtattctcaataagccgatgaatatgcagctgctgggcgatgcgcagccgcat
gaacgttctgaccgtggtgagcgtcgcggcggcggccgtagcggtttcggcggcggcgaa
cgtcgtgagggcggtcgcgaaggcggtcgtcgctttagcgaacgtcgtgaaggcggcggg
cgcagcttcaaccgcgaaggcgctaaccgtggcccgcgtcgtgaagatagcgccggtacc
ggtgccgttcgtcgtcgcgattactaa
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