Moorella thermoacetica DSM 2955: MOTHA_c06790
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Entry
MOTHA_c06790 CDS
T06429
Symbol
rapA1
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
mthz
Moorella thermoacetica DSM 2955
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Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AKX96036
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Position
666048..668966
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AA seq
972 aa
AA seq
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MQPGILVRSTIYPEKGIGLVLGNEEFFDQVYVHVFFEKTRERLTLPLADLSPLHDPLAKM
EAGSFSTASRFQLRWLVEQILAENSGEGLLAAGGFKIIPLPHQLLAVSFVLDQFKPRVLI
ADEVGLGKTIEAALIYEELKARGMVKRVLVVAPSGLCLQWREEMKTKFGEDFIIYDRSTV
HSLKQLHGEMTNVWTLADRVITSLDFIKPKKITADLDERAARARRWHNEQVFAAAAAAWF
DMVIFDEAHKLTKDMTGEETARYKAGHALVQAAPIVLLLTATPHQGDQHKFRNLLRLIDP
YLFSGEGRITAEDVKKVTVRNNKRAVVDFHGNRLFKQRVATVCLIHRDEVADQVELDLYR
AVTDYVTTFYELARQQNNFTMMFLLLIYQRMVSSSSPAILKSLSARLAALEELRRRAADQ
EPESEREEPDWDDLQELTAEEQLAELTRASAAPRAGIVIVPAALAAEIAALKKCLALAER
ATAGRNDIKFTRLLEIINELRIQENNPRLKFIIFTEFRETQAYLEERLTSLGYRTALING
AMSTTERIAQVERFRREADFLISTDAGGEGINLQFCHILINYDLPWNPMRLEQRIGRIDR
IGQEHDVKVINLQLADTVENRVREVIENKLDTIRREFCAGEDKLADILGVLQDEFDFEKV
YIEALLKQGRKAANLDALSWQIFERAREIVEEERLALPISNLAPEYVLASQRDLEKRAKR
VQRLVEQYLQVYGASLHPYKLREGVYYFQDPRSGRRLHNVIFQQKYALANEGAELLSFQH
PYMVELLAHLEDALREDTSAKLLVRERKFSGEKGFLFIYRLTLTNYLDPTVYYLVPCFVS
FAGDTGRVNGRISRYFRDWEQLICTDLVTGEIPYNLKEAWQLARKAVQQEAEVLFFQAKE
RLEKRLRDEEEKFEKYYKDREAAIEKIAVDNIRAAKKKELEEDRKTRRQEWLRRRQLVPS
LSLEQVAYVEFA
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcccggaattctggtccgcagcaccatttatccggaaaaagggataggcttggtc
ctggggaatgaggagtttttcgaccaggtctacgtgcacgttttctttgaaaagaccagg
gagaggctcaccctgcccctggccgacttaagtccgctccatgatccgctggccaaaatg
gaagcaggcagcttttccaccgcttcccgcttccagctgcgctggctggtggagcaaatc
ctggcagaaaattccggggagggccttttggccgccgggggcttcaagattatccccctg
ccccaccagctcctggcagtaagcttcgtcctcgaccagttcaagccgcgcgtcctgatc
gccgacgaggtcggcctgggcaagaccattgaggctgccctgatctacgaggaactgaag
gccaggggtatggtaaaaagggtgctggtggtagcgccgtcggggctttgcctccagtgg
cgggaggaaatgaaaaccaagttcggcgaagactttatcatctacgatcgcagcaccgtc
cattctctgaaacagcttcacggggagatgaccaacgtctggaccttggccgaccgggtg
attacttccctggacttcatcaagcccaaaaagattaccgccgacctggacgagcgtgca
gcacgtgcccgccgctggcacaacgagcaggtttttgcggccgcagccgccgcctggttc
gacatggtaatcttcgacgaagcccataaacttaccaaagacatgaccggcgaggaaacg
gcccgctataaggcaggtcatgccctggtccaagcggcgcccatagtgcttctccttact
gccaccccccaccagggggaccagcacaagttccgcaacctgctccggctcatagaccct
tatttattctccggggaaggccggattacggctgaagacgttaaaaaggtaacggtgcgc
aacaataagcgggcggtggttgatttccacgggaaccgccttttcaagcagcgggtggcc
acagtgtgcctgatccaccgggacgaggtggcggaccaggtggagctggacctctaccgg
gcggtgaccgattatgtaactactttctacgaactggcccggcagcagaacaatttcacc
atgatgttcctgctgctcatttaccagcgcatggtaagcagcagctcccccgccattctg
aagtccttatccgcccgtctcgcggccctggaggagctgcgccgccgtgcagccgaccag
gagccagagagcgagagggaagaacccgactgggacgacctgcaggaactgacggcggag
gagcagttggccgaactaacgcgggccagcgctgccccgcgggccggtatcgttatcgta
ccggccgccttggcggccgagatcgcggccctgaaaaaatgcttggccctagcggagcga
gccacagccggccgcaacgatatcaagttcaccaggcttctggaaatcattaatgaactc
agaatccaggaaaacaatccccgcctaaaatttatcatctttaccgagtttagggagacg
caagcttacttagaggagcgcctgaccagcttgggctaccggacggcgctcattaatggt
gccatgtccaccaccgagcgcattgcccaggtggagcgcttccgccgcgaggcggatttc
ctcatttctaccgatgctggcggcgagggcataaacctgcagttctgccatatcttgatc
aactacgatctgccctggaaccccatgcgcttggagcagcgcatcggccgcattgaccgc
atcggccaggaacatgacgttaaagtgatcaatctacaactggcggacacggtggagaac
cgggtgcgggaggtaatcgaaaacaagctggacaccatccgcagggagttttgcgctggc
gaagataagctggctgacattctaggggtcttgcaagatgaattcgattttgagaaggtg
tatatcgaggccttgctcaagcagggccgcaaggcagccaacctggatgcattatcctgg
cagatttttgaacgagcccgggaaatcgttgaggaagaaagattagctctgcctatctcc
aatttggcccctgaatatgttttagcgtcgcagcgagatttggagaagagagccaagagg
gtgcaaaggctggtagagcaatacctgcaggtttacggcgccagcctgcacccgtacaag
ctgagagagggcgtttactactttcaggaccccaggagcggcaggcgcctgcataacgtg
atcttccagcagaaatatgccctggccaatgagggggccgagcttttgagtttccagcac
ccctatatggtggaactgttagcccacctggaggatgccctgcgggaggatacgtcggca
aagcttttggtacgtgagagaaagttcagcggggaaaaagggtttctgtttatataccgg
ctgaccctcacaaactacttggaccctactgtttactatctggtaccttgttttgttagc
tttgctggggatacggggcgggtaaacggcagaatatcccgctattttcgcgattgggag
cagctcatctgcaccgacctggtaaccggagagataccgtataatctaaaggaggcctgg
caactggcccggaaggctgtgcagcaggaagcagaggttctcttctttcaggcaaaggaa
cgtttggagaagaggctgcgggatgaagaggaaaagtttgagaaatactacaaggaccgg
gaggcggccatcgagaagattgccgtggacaatatccgcgcagccaagaaaaaagagctg
gaagaggaccgaaagactaggcggcaagaatggttgcgccgccggcagctggtgcccagc
ctaagcctagagcaagttgcctacgtggagtttgcatga
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