Mycobacterium tuberculosis CTRI-2: MTCTRI2_2107
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Entry
MTCTRI2_2107 CDS
T01993
Symbol
sigC
Name
(GenBank) RNA polymerase sigma factor SigC
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mto
Mycobacterium tuberculosis CTRI-2
Brite
KEGG Orthology (KO) [BR:
mto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mto03021
]
MTCTRI2_2107 (sigC)
Transcription machinery [BR:
mto03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MTCTRI2_2107 (sigC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
Dioxygenase_N
DUF134
CHMI
Motif
Other DBs
NCBI-ProteinID:
AEN00526
LinkDB
All DBs
Position
2326869..2327426
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AA seq
185 aa
AA seq
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MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLR
AIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFED
LVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEP
DDLTG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgacggcaagcgacgacgaggccgttaccgcactcgccttgtcggcggccaag
gggaacgggcgggcccttgaggcgtttatcaaagccacccagcaagacgtgtggcggttc
gtcgcctatctgtccgacgtgggcagtgcggacgatctcacccaagagacattcctacga
gcgatcggcgccatcccgcggttttccgcacgctccagcgcccgaacttggttgctggcc
atcgcgcgccatgtcgtcgccgatcacatccgccacgtccgatcccggccccgcaccacc
cgcggcgcgcgtcccgaacatctcatagacggcgaccgccatgcccgcggattcgaagac
ctcgtcgaggtaaccacgatgatcgccgacctaaccaccgaccaacgggaagcgctgctg
ctgacccagctgctcgggctgtcctatgcggacgccgcggcggtgtgcggctgcccggtg
ggcaccatccgatcccgtgtcgctcgagcgcgcgatgcgctgcttgccgacgcggagccc
gacgacctcaccggctag
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