Micromonospora tulbaghiae: CSH63_05300
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Entry
CSH63_05300 CDS
T05651
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mtua
Micromonospora tulbaghiae
Pathway
mtua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSH63_05300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtua03019
]
CSH63_05300
03400 DNA repair and recombination proteins [BR:
mtua03400
]
CSH63_05300
Enzymes [BR:
mtua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSH63_05300
Messenger RNA biogenesis [BR:
mtua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CSH63_05300
DNA repair and recombination proteins [BR:
mtua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CSH63_05300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
HTH_24
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AYF26875
UniProt:
A0A386WEX5
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All DBs
Position
1182078..1183718
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AA seq
546 aa
AA seq
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MILLFRSFRLRRAARRHFGWEELRPAQMQAMRTLLAGGDVLVVLPTGGGKSAIYQVPAAL
LRGPTVVISPLLALQQDQISNLNNRGDPALRAVRISSAESASRQVAALEELRAGRAKFLF
ITPEQLASPDRLAQVRALRPALVAVDEAHCISSWGHDFRPDYLALGHLIRGLGSPPVVAL
TATASPPVRENITTLLGMRRPRLVLSGLDRPNLFVAAVQCPSEEYRWRRLLTLLKEADPP
GIIYTPTRRAAEELTRRLSSAGHSAQAYHGGMAAGVRHRRHEDFLADRVPIMVATSAFGM
GIDKQNIRWVAHMALPDSPDSYLQEIGRAGRDGEAARALLLYRPEDVALHRFFNAGSPDL
AELRAVAVALHRGPLTRTALAKAVGLSQRKVASYVGLLEQVGAVATGSKAQLHVAPRAQL
PEQVAREALAEHSRRQAGQRSRTDMMRRFAEGQGCRMQALLGYFGEQANHPCGHCDNCQA
GTSEVLPEDGPYPLHSTVRHPKWGFGMVLGYEKDRVTVLFDDVGYKMLSVSVVQTQGLLT
LHKDRR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgattcttctctttcgctcctttcggctacggcgcgccgcccgtaggcacttcggctgg
gaggagctgcgtcccgctcagatgcaggcaatgcgcacgctactggccggtggtgacgtg
ctggtcgttctccctaccggcggcgggaagtccgctatctatcaggtgcccgccgcgctc
ctgcggggtcctacggtggtgatttcgccgctgctggctctgcagcaagatcagatcagc
aatctcaacaacaggggcgaccccgcgttgcgcgcagttcgcatcagctcagcggagagc
gcaagtaggcaggtggcggcattggaggagctgcgcgcggggagggcgaagttcctgttc
attacgccggaacagctcgcctcaccggaccggcttgctcaggttcgagccttgagaccc
gccttggtcgcggttgacgaggcgcattgcatctcgtcctgggggcacgactttcggccg
gactacttggctctcggacatctcatacgcgggctcgggagcccgcctgtggtggctctg
accgcaacggcctcacccccggtgcgcgaaaacatcaccacgctgctcggtatgcgtaga
ccgcggctcgtgctgtccggactcgaccgtccaaaccttttcgtcgccgctgtccaatgc
cccagtgaggaataccgatggcggaggttgcttaccctgctcaaagaggcggatcccccc
gggatcatctacaccccaactcgccgcgccgcagaggaactcacgcgaaggctatccagc
gcgggtcattccgctcaggcatatcacggcgggatggctgctggagtgcgccaccgtcgt
cacgaggatttccttgctgaccgtgtgccaatcatggtggccacctcggcgttcggcatg
ggcattgataagcagaacatccgctgggtggcccacatggccttgcccgactcgccggac
agctacctacaggagattggacgggccggccgcgatggagaggcagcccgagcgttgctg
ctctaccggcctgaagatgtggcgctgcaccgcttcttcaatgctggctcgcctgatttg
gcagagctgcgagcagttgccgtcgccttgcatcgtggcccgctcactcgtacggctctc
gccaaggccgtcggcctgagccagcgcaaggtggcgagctacgtcggcctgctcgagcag
gtgggcgccgtagcgacaggctcgaaagctcagctccacgttgccccccgtgctcagctg
ccggagcaggtggcgcgggaggcgctggcggagcacagccgtcgccaggccggccagcgc
tcccgcaccgacatgatgcgccgctttgccgagggccagggatgccggatgcaggcgctg
ctgggctacttcggagagcaagcgaatcacccctgcggacactgcgacaactgtcaagca
ggcacctccgaggtccttccggaggatgggccgtacccactgcatagcaccgttcggcac
ccaaaatgggggttcggtatggttctgggttacgagaaagaccgcgttaccgtcctcttc
gacgacgtcggttacaagatgctgtcggtatcggtcgtgcaaactcagggtctgctgacc
ctccacaaggatcggcgatag
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