Mycobacterium tuberculosis CAS/NITR204: J113_18345
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Entry
J113_18345 CDS
T02652
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mtuc
Mycobacterium tuberculosis CAS/NITR204
Brite
KEGG Orthology (KO) [BR:
mtuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtuc03016
]
J113_18345
Enzymes [BR:
mtuc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
J113_18345
Transfer RNA biogenesis [BR:
mtuc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
J113_18345
Prokaryotic type
tRNA splicing ligases
J113_18345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AGL28082
UniProt:
R4MKS5
LinkDB
All DBs
Position
2947446..2948558
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AA seq
370 aa
AA seq
DB search
MQVVNVATLPGIVRASYAMPDVHWGYGFPIGGVAATDVDNDGVVSPGGVGFDISCGVRLL
VGEGLDREELQPRLPAVMDRLDRAIPRGVGTAGVWRLPDRNTLQEVLTGGARFAVEQGHG
VALDLERCEDGGVMTGADAAKISDRALQRGLGQIGSLGSGNHFLEVQAVDRVYDPVAAAP
MGLAEGTVCVMIHTGSRGLGHQICTDHVRQMEQAMGRYGIAVPDRQLACVPVHSPDGQAY
LAAMAAAANYGRANRQLLTEATRRVFADATGTPLDLLYDVSHNLAKIETPIDGQLRRVRA
PQGRHPLAAAAPSRAAGRTGSGRPTRADTRDDGYGVICACRGHRQPGVLFHRAWCWAGTE
PSPGRPPHQR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtggtcaacgtggctacgctgccggggattgtccgggcctcgtatgcgatgccc
gatgtgcactggggatatggtttcccaatcggcggcgtggccgcaaccgacgtcgacaat
gatggagtcgtttccccaggcggtgtcggcttcgatatttcgtgcggcgtaagactcttg
gtcggcgaagggctggaccgcgaggagctgcaaccacggttgccggcggtcatggaccgg
cttgatcgcgcgataccgcgcggagtgggcacggcgggtgtgtggcgactacccgaccgg
aacacgctgcaggaggtgctcaccggtggtgcccggtttgcggtggaacaggggcatggc
gtcgcgctagacctcgagcggtgcgaagacggcggtgtgatgacaggagcggacgcggcc
aaaatcagtgaccgggccctccaacgcgggcttgggcagatcggcagccttggctcgggc
aaccacttcctggaagtccaggccgtggaccgcgtctacgatccggttgcggccgcgccg
atgggtctggcggaagggaccgtctgcgtgatgatccacaccggctcacggggcctgggc
catcagatctgcacggatcacgtccgccagatggaacaagccatgggccgatacggaatc
gcggtgcccgatcgccaattggcttgtgtgccggtgcactcccccgatgggcaggcctat
ctcgccgcgatggcggcggcggccaactacggacgcgccaaccgccaactgctgaccgag
gcgacgcgtcgtgtgttcgctgatgcaaccggaacacctctggacctgctctacgacgtg
tcgcacaacctggccaagatcgagacgcccatcgacggtcagctgcgccgtgtgcgtgca
ccgcaagggcgccacccgctcgctgccgccgcaccatcacgagctgccggccgaactggc
agcggtcggccaacccgtgctgatacccgggacgatgggtacggcgtcatatgtgcttgc
cggggtcaccggcaacccggcgttcttttccaccgcgcatggtgctgggcgggtactgag
ccgtcaccaggccgcccgccacaccagcggtga
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