KEGG   Methylocella tundrae: MTUNDRAET4_2618
Entry
MTUNDRAET4_2618   CDS       T05970                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
mtun  Methylocella tundrae
Brite
KEGG Orthology (KO) [BR:mtun00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtun03021]
    MTUNDRAET4_2618 (rpoH)
Transcription machinery [BR:mtun03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MTUNDRAET4_2618 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_19 Sigma70_r3 HTH_3 HTH_11 Sigma70_r4_2 HTH_20
Other DBs
NCBI-ProteinID: VFU09505
UniProt: A0A4U8Z2E6
LinkDB
Position
1:complement(2354333..2355238)
AA seq 301 aa
MSAALPMISSESGLARYLNEIRRFPMLEPQEEYMLAKSWREHADKDAAHKLVTSHLRLVA
KIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPDKGFRLATYAMWWIRASIQEYILRSWS
LVKMGTTASQKKLFFNLRKVKSQISALEEGDLKPDHVAKIAHRLGVSEQDVVDMNRRMSG
DASLNAPLREEGEGEWQDWLVDDSASQENTLLDREEKDNRLGALHNALGVLNDRERRIFE
ARRLADDPMTLEALSDEFDISRERVRQIEVRAFEKVQSAVKAGVARIEMQTRTPQIAGPA
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgagtgctgcgctgccgatgatctcaagtgagagtgggctcgctcgttacttgaatgaa
atcagacggttccccatgctggagccgcaggaagaatatatgctggcgaaaagttggcgc
gaacatgctgacaaggacgccgcccataagctcgtgacgtcgcatctgaggctcgtcgcc
aaaatcgcgatgggttaccgcggctatggtttgccgatcagcgaagtcgtatccgaaggg
aacgtcggcttgatgcaagccgtcaaacgcttcgagccggataaaggctttcgtctcgcc
acatacgcaatgtggtggatccgcgcgtcaattcaagagtatatcctgcgttcgtggtcg
ctcgtgaagatgggcacgaccgcaagccagaagaaactcttcttcaacctgcgtaaggtg
aagagtcagatttcggcgctggaagaaggcgacctcaagcctgaccatgtggcgaagatc
gcgcaccggctcggcgtttccgagcaggacgtcgtcgatatgaaccggcgcatgtcgggt
gacgcttcgctcaacgcgcccctgcgcgaagagggcgagggcgagtggcaggattggctc
gtcgacgatagcgccagccaggagaacacgcttctcgatcgtgaggagaaagacaatcgc
ctcggcgccttgcataacgcgctgggcgtgttgaacgatcgtgagcgccgcattttcgag
gcgcgccggctggccgacgatccgatgacgctggaggcgctctccgacgaattcgatatc
tcgcgcgagcgtgtgcggcagatcgaagtgcgcgcctttgaaaaggtgcagtccgccgta
aaggccggcgtcgcgcgtatcgagatgcaaacgcggacgccgcagatcgccgggccggcc
gcgtag

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