Mycobacterium tuberculosis CCDC5079: CFBS_1400
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Entry
CFBS_1400 CDS
T02679
Symbol
alkA
Name
(GenBank) ada regulatory protein AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mtur
Mycobacterium tuberculosis CCDC5079
Pathway
mtur03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFBS_1400 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtur03000
]
CFBS_1400 (alkA)
03400 DNA repair and recombination proteins [BR:
mtur03400
]
CFBS_1400 (alkA)
Enzymes [BR:
mtur01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CFBS_1400 (alkA)
Transcription factors [BR:
mtur03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CFBS_1400 (alkA)
DNA repair and recombination proteins [BR:
mtur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFBS_1400 (alkA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AGL99832
LinkDB
All DBs
Position
complement(1477565..1479055)
Genome browser
AA seq
496 aa
AA seq
DB search
MHDDFERCYRAVQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE
GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL
LQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT
ALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLR
LPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR
AVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHT
FPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGP
WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWT
TLEHPVNQWPPQEKIA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgacgacttcgaacgctgctaccgggcggtccagtccaaagacgcccggttcgac
ggctggttcgtcgtcgcggttttgaccaccggtgtctactgccggccgagttgccccgtc
cggccaccgttcgcgcgcaatgtccggttcctgccgactgcggcggccgctcagggggag
ggattccgggcctgcaaacggtgccgccccgacgcctcgcctgggtctccggaatggaat
gtgcgtagtgacgtcgtggcgcgggcgatgcggctgattgccgacggaacggtggaccgc
gacggtgtcagcggcctcgcggcccagctcggttacaccattcgccagctggagcggctg
ttgcaggccgtggtcggcgccggtccgctcgcgttggcccgcgcccaacgcatgcagacc
gcccgggtgctgatcgagaccacgaacctgccgttcggcgatgtcgcattcgccgccggg
ttttccagcatccgtcagttcaacgacaccgttcgcctggcgtgcgacggcacaccgacg
gcattgcgtgcgcgcgcggccgcccgattcgagtctgccaccgcatcagcgggcacggtg
tcgctgcggctacccgtccgtgcaccattcgccttcgagggtgttttcggccatctggcc
gccaccgcggtgccgggttgcgaagaggtccgcgatggtgcgtaccgacgcacgctacgg
ctcccatggggcaacggcatcgtcagcctgacgccggcacccgatcatgtgcgctgcctg
cttgtgctcgatgatttccgcgacctgatgacggccactgcacgttgccgacggctgctg
gacctcgacgccgatcccgaagcgatcgtcgaggcgctgggcgccgatccggatctgcgc
gcagtggtgggcaaggcacccgggcaacgcattccccgcacagtcgacgaggcagaattc
gccgtgcgggcggtcctcgcccaacaggtatcgacgaaggccgcaagcactcacgcgggc
cgactggtcgccgcctacggacggccggtccacgatcgccacggcgctttgacccacacc
ttcccgtcgatcgagcagctcgctgagatcgatcccggccatctggccgtccccaaggcg
cgtcaaaggaccataaacgcgctcgtcgccagccttgccgacaaaagtctggtcctggac
gccggatgtgactggcaacgcgcccgcgggcagttgctagcgctgcccggagtgggcccc
tggaccgcggaggtcatcgccatgcgcggcctcggtgacccggacgcctttccggccagt
gatctcggcctgcggctggccgccaaaaagctgggcctgcctgcacaacgacgagccctg
acggtgcacagcgctcgctggcgcccctggcgctcctatgccacccagcacctgtggacc
accctggaacatccggtaaaccaatggccaccgcaggagaagatcgcatga
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