Mycobacterium ulcerans: MUL_5060
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Entry
MUL_5060 CDS
T00435
Symbol
pcnA
Name
(GenBank) poly(a) polymerase PcnA
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mul
Mycobacterium ulcerans
Pathway
mul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUL_5060 (pcnA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mul03019
]
MUL_5060 (pcnA)
Enzymes [BR:
mul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MUL_5060 (pcnA)
Messenger RNA biogenesis [BR:
mul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MUL_5060 (pcnA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ABL06923
Pasteur:
MUL_5060
UniProt:
A0PX54
LinkDB
All DBs
Position
complement(5611594..5613039)
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AA seq
481 aa
AA seq
DB search
MPETVQDADLLTAAAVALNRHAAVLRELGSAFADAGHDLYLVGGSVRDALLGRLKSPDLD
FTTDARPQQILKIVRPWADAVWDTGIEFGTIGIAKNDYRLEITTFRADSYDQVSRHPEVR
FGERLEDDLVRRDFTVNAMAVRITASGPGEFLDPLGGLSVLRDKVLDTPAAPSVSFGDDP
LRMLRAARFVSQLGFAVAPRVRDAIEEMAPQLARISAERVAAELDKLLLGEDPVAGIDLM
VHTGMGEVVLPEIGGMQMAIDEHHQHKDVYQHSLTVLRQAIELEDEGPDLALRWAALLHD
IGKPATRRHEANGGVSFHHHEVVGAKMVRNRMRALKYSKQMVDDVSQLVYLHLRFHGYGD
GKWTDSAVRRYVTDAGPLLARLHKLVRADCTTRNKRRAARLQSSYDRLEERITELAAQED
LDRVRPDLDGNQIMTLLDIPAGPQVGEAWRYLKELRLERGPLTIEEAKAELLSWWRSRGN
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaaaccgtccaggatgccgacctgctgaccgctgccgcggtagccctcaatcgg
cacgccgccgtgcttcgtgaactcggatcggccttcgccgatgcgggtcacgacttgtat
ctggtcggtggttcggttcgcgatgccctgctgggccggttgaagtcccccgacctggac
ttcaccaccgacgcccgcccgcaacagatactgaagatcgtgcgcccctgggccgatgcc
gtgtgggacacgggcatcgaattcgggacgattggcatcgccaagaacgactaccgcctg
gagatcacgaccttccgggccgacagctacgaccaggtttcacggcaccccgaggtccgt
ttcggcgagcgcctcgaagacgacctggtgcgccgcgatttcaccgtgaatgcgatggcc
gtgcggatcacggcgagtggcccgggcgagttcctcgatccgttgggcggtttgtcggtg
ctgcgcgacaaggtgctcgacacgccggccgcgccttcggtgtccttcggtgacgacccg
ctgcgaatgctgcgggccgcgaggttcgtctcccagctcggcttcgccgtggcaccgcgg
gtgcgggacgcgatcgaggaaatggccccgcaactggcacgcatcagcgccgaacgagtc
gccgcggagctggacaagctgctgctgggcgaggatccggtggccggcatcgacctgatg
gtgcacaccggaatgggcgaggtggtgctccccgagatcggtggcatgcagatggccatc
gacgaacaccaccagcacaaggatgtctaccagcactcgctgaccgtgctgcgccaagcg
atcgaactggaagacgaaggaccggacctggcgctgcggtgggcggcgctgctgcatgac
atcggcaagccggccacccgacgccacgaggccaacggcggcgtgagttttcaccaccac
gaggtggtgggcgccaagatggtgcgcaaccggatgcgggccctcaagtactccaagcag
atggtcgacgacgtctcgcagctggtgtatctgcacctgcgattccacggctacggcgat
gggaagtggacggactcggcggtgcggcgctatgtcaccgatgcgggaccgctgctggcg
cgactacacaagctggtacgcgctgactgcaccacccgcaacaagcgtcgggccgcgcgc
ctgcaatccagctatgaccggctcgaggagcggatcaccgaactggccgcccaggaggac
ctggaccgggtgcggccggatctggatggcaaccagatcatgacgctgctcgacattccg
gccggccctcaagtcggtgaggcgtggcgctatctcaaagagctgcggctcgagcgtgga
ccgttgaccatcgaggaagccaaggccgaactgctgtcctggtggcgatcgcgggggaac
ccctag
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