Meriones unguiculatus (Mongolian gerbil): 110551497
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Entry
110551497 CDS
T05884
Symbol
Sympk
Name
(RefSeq) symplekin isoform X3
KO
K06100
symplekin
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03015
mRNA surveillance pathway
mun04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110551497 (Sympk)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110551497 (Sympk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mun03021
]
110551497 (Sympk)
03019 Messenger RNA biogenesis [BR:
mun03019
]
110551497 (Sympk)
Transcription machinery [BR:
mun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110551497 (Sympk)
Messenger RNA biogenesis [BR:
mun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110551497 (Sympk)
U7-dependent histone pre-mRNA processing factors
110551497 (Sympk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
110551497
NCBI-ProteinID:
XP_021497809
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All DBs
Position
1:complement(145285786..145316372)
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AA seq
1271 aa
AA seq
DB search
MASGSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISDLQEACWDMVSSMAGEIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNALWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSNKDSRKRPRDDADSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPETMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLSVQGQAISVVGSLSTMSPLEEEVPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRRYCEDESRAYLGMSTLGDLIFKRPSRQFQYLHVLLDL
SSHEKDRVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
ARLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPEVKEAPSGPLEEDDLEPLALAPAPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPTGVAPAPSVSSTPSGTARTGPTPVEEAMEYREEGPESET
PAIFISMDDDSGLAETTLLDSSLEGPLPKEAAAVGLSSKDERSPQSLSHAVDEVLKTSSP
EAREPESKGNS
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcggcagcggggacagtgtcacccgccggagtgtggcatcccagttcttcaca
caagaagaagggccaggcattgatggcatgaccacttctgagagggtggtcgatctcctg
aaccaggctgcgctcatcaccaatgactcaaagatcacagtgctcaaacaggtccaagag
ctgatcatcaacaaagaccccaccttgctggacaacttcctggatgagatcatcgctttc
caagcagacaagtcaattgaagtgcgcaagtttgtcattggcttcattgaggaggcatgc
aagcgggacattgagctgctgctgaaactgattgccaacctcaacatgctcttacgggac
gaaaacgtgaatgtggtaaagaaagccattctcaccatgactcagctctacaaggtggcc
ctgcagtggatggtgaagtctcgtgtcatcagtgatctccaggaggcctgctgggacatg
gtgtcctctatggccggggaaatcatcctgctgttagattctgacaatgacggcatccgt
acacatgccatcaagtttgtggagggcctcattgtcaccctttcgccccgcatggctgac
tcggaggtcccccgacgccaggaacatgacatcagtctggaccgcattcctcgtgatcac
ccctacatccagtacaatgccctatgggaagaaggcaaggcggctctggagcagttgctg
aagttcatggtacaccccgccatctcctccatcaacctgaccacagcgctgggctctctt
gccaacatcgcccgccagagacccatgttcatgtccgaggtgatccaggcatatgagact
ctgcacgccaacctgcccccaacactggccaagtcccaggtgagcagcgtgcgtaagaac
ctcaagctgcacttgctgagcgtgctcaagcaccctgcctccttggagttccaggcccag
atcaccaccctgctggtggacctgggcacgcctcaggctgagattgcccgtaatatgcct
agcaacaaggactcccgaaagcggccccgggacgatgcagactctacgctcaagaagatg
aagctagagcccaacttgggagaggacgatgaggacaaagacttggagcctggcccatca
gggacttcaaaggcctcagcccagatctcaggccagtcagacacagacatcactgctgag
ttcttgcagcctctgctgacacctgacaatgtggccaatctggtcctcatcagtatggtg
tacctccctgagaccatgcctgcctcctttcaagccatctatactcctgtggagtcagca
ggcactgaagcccagatcaagcacctggctcggctcatggccacacagatgacagctgca
ggactgggtcctggtgtggagcagaccaaacagtgcaaggaggagcccaaggaggagaag
gtggtgaagcccgagagtgtcctgatcaagcggcgcctgtcagtgcagggccaggccatc
tctgtggtgggctctctgagcaccatgtcccccctggaagaggaggtaccccaggccaag
agaaggccagaacccatcatccctgtcacacagccacggctggcaggtgctggtgggcgc
aagaagatcttccgtctgagcgatgtgctgaagcccctgacagatgcccaggtggaagcc
atgaagctgggagctgtgaagcggatcctgagagctgagaaggccgtagcctgcagtggg
gcggcccaggtccgcatcaagatcctggccagcctggtaacacagtttgactctggactc
aaggcagaggtgctgtccttcatcctggaagatgtccgggcccggctagacctggctttt
gcctggctctaccaggagtacaatgcctacctggcagcaggggcctccggcaccctggac
aaatatgaggactgcctcatccgcctgctctctggactgcaggagaaaccggaccagaag
gatgggatcttcaccaaggtggttttggaggccccactgatcaccgagagtgccttggag
gtgatacggaggtactgtgaggatgagagccgtgcctacctggggatgtcgacacttgga
gacctgatcttcaagcgcccttctcgccagttccagtacctgcacgtgctccttgacctc
agctcccatgagaaggacagggtgcgctcccaggccctactcttcattaagcgtatgtat
gagaaggagcagcttcgagagtatgtggaaaaattcgccctcaactacctgcagctcctg
gtccaccccaaccccccttcagtgctgttcggagctgataaggacacagaggtggctgcg
ccctggacggaggagacagtgaagcaatgtttatatctgtatctggctctcctgcctcag
aaccacaagctgattcatgagttggcagctgtgtacaccgaggccatcgccgacatcaag
cggacagtgctgagggtcattgagcagccgatccgaggaatgggcatgaactcaccagag
ctgctgctgctggtcgaaaactgccccaagggggcggagaccctggttacccgatgcctg
cacagcctcactgacaaagtaccgccatccccagaactggtgaagcgggtccgagacctg
taccacaagaggctgcctgacgtgcgcttcctcatccctgtgctcaatgggttggaaaag
aaagaggtgatccaggccctgcccaagctcatcaaactcaaccccatcgtggtgaaggaa
gtcttcaaccgcctgctgggcacccagcacggtgaagggaactcagccttgtcccccctg
aatcctggagagctgctgattgcattgcacaacattgactcagtgaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgttttgcggagcggaatgtgtacacttcggaagtg
ctagctgtggtgatgcagcagctgatggagcaaagtcctctgcccatgctgctcatgagg
accgtcatccagtccctgaccatgtatccccgcctggggggcttcgtcatgaacatcctg
gcccgactcatcatgaagcaggtgtggaagtaccctaaggtatgggagggcttcatcaag
tgctgccagcgaactaagccccagagcttccaggtcatcctgcagctacctccgcagcag
cttggtgcggtctttgacaagtgccctgagctccgggagccgctgctggcccatgtgcgc
tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcctggaagcc
agcggcaagcaggagccggaagtcaaggaagcaccttcagggcccctggaggaggatgac
ctggagcccttggctctagccccggcccctgccccacggccccctcaggacctcatcggc
ctgcgattggctcaggagaaggccttgaagcggcagctggaggaggaacagaagctgaag
cccacaggcgtggcgcccgcaccctccgtgtcctcaacaccttctgggacagcgcgaact
ggccccacaccggttgaggaagctatggaataccgggaggagggtcccgagagtgagacc
ccggccatcttcatcagcatggacgacgattcagggctggccgaaaccacactcctggac
tctagtctcgagggccccctgcctaaggaggcagcagcagtcgggctgagctccaaggat
gagcggagcccgcaaagcctcagccatgctgtggacgaagtcttgaagacctccagcccg
gaggccagggagcccgagagcaaggggaacagctga
DBGET
integrated database retrieval system
