Meriones unguiculatus (Mongolian gerbil): 110555900
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Entry
110555900 CDS
T05884
Symbol
Col13a1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110555900 (Col13a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mun00536
]
110555900 (Col13a1)
Glycosaminoglycan binding proteins [BR:
mun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110555900 (Col13a1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
110555900
NCBI-ProteinID:
XP_060225457
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Position
16:23920148..23991819
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AA seq
613 aa
AA seq
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MPGRVGIKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGE
TGLVGPRGQPGPQGQKGEKGQCGEYPHREHPGGMLAALYSNPLISLKLLPLLNSVRLAPP
PVIKRRTFQGEQGQAGIQGPPGPPGPPGPSGPLGHPGLPGPIGPPGLPGPPGPKGDPGIQ
GYHGRKGERGMPGMPGKHGAKGSPGIAVVGMKGDPGTPGAKGEKGATGSPGLSGLLGQKG
EKGDSGNAIGGGRGEPGPPGLPGPPGPKGEAGVDGQAGPPGQQGEKGQPGAAGEQGPAGP
KGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQAGPPGPPGTPGQRGEIGLPG
PPGHDGDKGPRGKPGDMGPAGPQGPPGKDGPPGMKGEVGPPGSPGEKGETGQAGPPGLDG
PTGEKGEPGDEGRPGATGLPGPIGLPGFTGEKGEAGEKGDPGAEVPGLPGPEGPPGPPGL
QGVPGPKGEAGLDGTKGEKGSQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGP
KGERGSKGDPGMTGPMGAAGLPGLHGPPGDKGNRGHRGFKGEKGEPGLPGLDGLDAPCPL
GEDGLPVQGCWNK
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcctggacgtgtgggtatcaaaggtcaaccaggcgagaagggtgcccctggagatgcg
gggatgtccatcatcgggcctcgaggcccccctggccagccgggcactcgaggctttcct
ggatttccgggtcccattggtcttgacggcaagccgggccaccccggacctaaaggggag
acgggcctggtgggtccccgaggacaaccgggacctcagggacaaaagggagaaaagggt
cagtgtggcgagtacccacaccgggagcatccaggtggcatgctagcagctctgtactcc
aacccgctaatttccctaaagctgttgcctctcctcaattcagttcggctggctccaccc
ccagtcattaaaagacggacctttcagggagaacaaggccaggctggcatccaaggccct
ccagggccaccaggtcccccaggaccaagtggccccctgggacacccaggacttccaggg
cctatcgggccacctggtttacctgggcctcccggaccaaagggagacccagggatccag
ggctaccatggccgcaagggagagcggggcatgcccgggatgccaggcaagcacggagcc
aaggggtctcctgggatagccgtggttgggatgaagggtgatccaggaactccaggagcc
aagggcgagaagggggctacaggctcgcctgggctctccggcctcctggggcagaaggga
gaaaaaggtgattctggcaatgccattggaggaggcaggggggagcctggccctccaggg
ctccctggaccccctgggccaaagggagaagctggtgttgatggccaggctgggccccca
ggacagcaaggagaaaaggggcagccaggagcagctggggaacagggaccagctggcccc
aagggctccaagggtgaacccggcaagggggagatggtggattacaatggaaacatcaac
gaggcgcttcaggagatcaggacactggccttgatggggcctcctggccttcctggacaa
gcaggcccacctggacctccagggactccaggccaaaggggggagattggactgccaggc
cctccaggacatgatggagacaagggacctcgaggaaaaccaggagacatggggcctgct
ggcccccaaggaccccctggaaaggacgggcctccaggaatgaagggagaggtcggaccc
ccagggagtccaggggagaaaggggagacaggacaagcaggcccaccgggtctagatggc
ccaactggggagaaaggagaaccaggtgatgaagggaggcctggagcgacaggattgcct
gggcccatcgggctcccgggattcacaggagagaaaggagaagctggggagaaaggtgac
ccgggagcagaggttcctgggctgccagggccagagggtcctccaggacctccgggcctc
caaggtgttcctggaccaaagggagaagcaggcctagatggcaccaaaggagaaaagggc
tcccagggagaaaaaggagaccgggggcctctgggattgcctggagcttcaggtttggac
ggcaggcctgggccaccgggtactccaggaccaattggagttccaggcccagccggacca
aagggcgagaggggaagcaaaggagacccagggatgacaggaccaatgggagcagctggg
ctgcctggtttacacggaccacccggggacaaagggaaccggggccaccgaggttttaaa
ggagagaaaggggagccggggctaccagggttggacggactggatgccccatgcccactg
ggagaagacggcttaccagtccaaggctgctggaacaagtga
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