Musa acuminata (wild Malaysian banana): 103972285
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Entry
103972285 CDS
T03447
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
KO
K10140
DNA damage-binding protein 2
Organism
mus
Musa acuminata (wild Malaysian banana)
Pathway
mus03420
Nucleotide excision repair
mus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103972285
09124 Replication and repair
03420 Nucleotide excision repair
103972285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
103972285
03400 DNA repair and recombination proteins [BR:
mus03400
]
103972285
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
103972285
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103972285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Myco_haema
Motif
Other DBs
NCBI-GeneID:
103972285
NCBI-ProteinID:
XP_009384848
UniProt:
A0A804LAS5
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Position
11:23811792..23817760
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AA seq
548 aa
AA seq
DB search
MPFASSSLRPRFLRREADSDEESETSSSGGEDDLEEDFPEEAQVEEDTADEVAPGKRKKP
PPITISLKRVCKVCKQSGHEAGFRGATYIDCPRKPCFLCKTPGHTTMSCPHRVAMEHGVI
PAPARNTKTPLDYIFMRQLKGKIPKIKPVYVIPDQVDCGLIRFHSRRVTCLEFHPTKSNI
LLSGDKKGQLGIWNYDKQHERTIYGSIHSCIVNNIKFSLGNDAMAYTSSSDGTVSCTDME
TGISTLLLDLNPDGWNGPASWRMLYGMDVNTEKGVLLVADNFGYLYLLDVRSNVKIGEPI
LVHKKGSKVVGLHCNPVQPDVLLSCGNDHFARIWDARRLGTESCLASLAHGRVVNSAYFS
PLTGNKILTTSQDNRIRVWDSIFGNLEYPSREIVHSHDFNRHLTPFRAEWDPKDPSESLV
VIGRYISENYDGVALHPIDFIDTSTGKLVAEVIDTDVTTISPVNKLHPQDHILATGSSRT
LLIWKARQEDWEAKKQPEKRPKQFIFRRNEKKSNGKFDSDSGGDSDYDSNGKKRKAKKCQ
GKYKKLVC
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcgcttcttcttccttgaggcctcgcttccttcggagggaagccgactccgac
gaggagagcgaaacctcgtcctccggcggagaagatgacctggaggaggacttccccgag
gaggctcaggtggaggaggatacggctgatgaggtcgcgccgggaaagaggaagaagccg
cctcccatcaccatcagtctcaagagggtttgcaaggtttgtaagcaatcgggccacgaa
gctggtttcaggggagccacctacatcgattgccccagaaaaccctgttttctctgcaaa
acgcctggtcacacaaccatgtcttgtccacatcgtgtagctatggagcacggtgtgatt
cctgcccctgcaaggaacacaaagaccccgttggattatatcttcatgcggcaacttaag
ggtaaaataccaaagatcaagccagtctatgtgatccctgatcaagtagactgtggatta
attaggttccacagtagacgtgtaacatgcttggaatttcatccaacaaagagtaatatt
cttctatctggagataagaaagggcaacttggcatttggaactatgataagcaacatgaa
aggacaatttatggatccatacactcgtgcatagttaacaacataaagtttagcctaggc
aatgatgcaatggcgtatacatcatcctcagatgggaccgtcagttgcactgacatggag
actggaatcagtactctcttattggatcttaacccagatggatggaatggccctgctagt
tggaggatgctgtatggtatggatgtcaatactgagaaaggtgttttacttgtagcagat
aattttggatacctctacttgttggatgtgcggtcaaatgtgaaaattggtgaaccaatt
ttagtacataagaaaggaagcaaggttgttgggcttcactgcaatcctgtacaaccagat
gttcttctaagctgtggcaatgaccattttgctcgaatttgggatgctagaaggttaggt
actgaatcttgcctcgccagtcttgctcatggacgtgttgtgaactctgcatatttctca
ccgctgaccgggaacaaaatcttgacaacatctcaagacaaccgcattagagtgtgggat
tcaatttttggcaatttggaatacccaagtagagagattgtccacagccatgattttaat
cgtcacttgactcctttccgagctgagtgggatccaaaggatccctctgaatcgcttgtg
gttattggtcgttacataagtgagaactatgatggggttgcattacatcctattgacttt
atagacacgagtactggtaagcttgtggctgaagtaatagacacagatgtaacaacaatc
agccctgtgaacaagcttcatcctcaagatcatattttggcaacggggagttcaaggact
ctgttaatttggaaagcaaggcaggaagattgggaagcgaagaagcaaccagagaagagg
ccaaagcagttcatatttaggaggaatgagaagaagtctaatgggaaatttgacagcgac
agtggtggtgattctgactatgactccaatgggaaaaaacgcaaagccaagaaatgccaa
ggtaaatacaaaaagctggtctgttga
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