Massilia varians: MasN3_38810
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Entry
MasN3_38810 CDS
T08769
Name
(GenBank) ATP-dependent DNA ligase
Organism
mvar
Massilia varians
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
BDT60387
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Position
complement(4331704..4333338)
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AA seq
544 aa
AA seq
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MREFARLYAELDDTTSTTRKLDALQSYFSHAAPENAAWAVYFLAGGKPRQAVPTKLLRQY
AIDYAGLDEWLFDESYHAVGDMAETIAHILPPPTRRSDVGLAEWMEHRIGPLRGADPGTI
RQALYAAWDELDWRERFLFVKLIGGGFRVGVSRLLVTRALAAIAAVDSKLIAQRLMGWTD
NSMRPTATSFLQLIAAQSDDEHKQRGGQPYPFFLAHQLQGEPAALGDIDDWQVEWKYDGI
RAQLVRRGGQNFLWSRGEDLITERFPELAGVPIPEGTVLDGEVLIWQPGVEAPAPFADLQ
KRIGRKTLSAKLLNELPAVLCCYDLLEFGGVDLRALPQHERRALMETEVAAIGLPQLRLS
PVIRADHWDALASLRAESRERGVEGMMLKARNAQYGVGRTKDVGTWWKWKIDPYTVDAVL
IYAQAGSGRRASLYTDYTFAVWDGEGEERRLVPFAKAYSGLTDAEIRQVDNAVRKTTIEK
FGPVRSVKPSMVFEIGFEGIALSTRHKAGIAVRFPRILRRRLDKPVEEADTLDTLKGLLA
AAGA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaattcgcccgcctctacgccgaactcgacgacaccacctccactacccgcaag
ctcgacgccctgcagtcctacttctcgcacgccgcgcccgaaaacgcggcctgggcggtg
tacttcctggccggcggcaagccccggcaagcggtgccgaccaaattgctgcgccagtac
gcgatcgactacgcgggcctggacgagtggctgttcgacgagtcctaccacgcggtgggc
gacatggccgagaccattgcccacatcctgccgccgccgacccggcgcagcgacgtcggc
ctggccgaatggatggagcacaggatcggtccgctgcgcggcgccgatccgggcacgatc
aggcaagccctgtacgccgcctgggatgaactcgactggcgcgagcgcttcctgttcgtc
aagctcatcggcggcgggttccgggtgggcgtgtcgcgcctcctggtcacgcgtgcgctg
gccgcgattgccgccgtcgacagcaagctgatcgcccagcgcctgatgggctggaccgac
aactcgatgcggcccaccgccaccagtttcctccagctgatcgccgcgcagtcggacgac
gagcacaagcagcgcggcggccagccctatcccttcttcctggcgcaccagctgcagggc
gaacccgccgcgctgggcgacatcgacgactggcaggtggagtggaagtacgacggcatc
cgcgcccagctggtgcgccgcggcggccagaatttcctctggtcgcgcggcgaagacctg
atcaccgagcgctttcccgagctggccggcgtgcccatcccggagggcacggtgctcgat
ggcgaagtcctgatctggcagcccggcgtcgaggcgccggcgccgttcgccgacctgcag
aagcgcatcggccgcaagaccctgagcgccaagctcttgaacgaactgccggcggtgctg
tgctgctacgacctgctcgaattcggcggcgtcgacctgcgcgcgctgccccagcacgag
cggcgcgcactgatggaaaccgaggtggcggcgatcggcctgccgcaactgcgcctgtcg
ccggtcatcagggcggatcactgggacgcgttggccagcctgcgcgccgaatcgcgcgag
cgcggcgtcgagggcatgatgctcaaggcgaggaacgcccagtacggcgtgggccgcacc
aaggacgtcggcacctggtggaagtggaagatcgatccctatacggtggatgcggtgctg
atctacgcccaggccggcagcgggcgccgcgcctcgctctacaccgactacaccttcgcc
gtatgggacggcgagggcgaggaacggcggctggtgccgttcgccaaggcctattccggg
ctcacggacgccgagatccggcaggtcgacaatgcggtgcgcaagaccaccatcgagaaa
ttcgggccggtgcgctcggtgaagccgagcatggtgttcgagatcggcttcgagggcatc
gccctgtcgacccgccacaaggccggtatcgcggtgcgcttcccgcgcattctgcggcgc
cgtctcgacaaaccggtcgaggaggccgataccctcgatacgctgaaaggcctgctggcc
gcggctggtgcatga
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