Methanosarcina vacuolata: MSVAZ_1620
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Entry
MSVAZ_1620 CDS
T03815
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mvc
Methanosarcina vacuolata
Pathway
mvc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSVAZ_1620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvc03400
]
MSVAZ_1620
Enzymes [BR:
mvc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
MSVAZ_1620
DNA repair and recombination proteins [BR:
mvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MSVAZ_1620
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Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AKB43889
UniProt:
A0A0E3Q3G2
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Position
2057564..2058397
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AA seq
277 aa
AA seq
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MPSKDLLFGTAGIPRSTKGTGSVSGIKRIRELGLDCMELEFVQGVRMSEKGAKNVLEAAN
NEEVALSVHAPYYINLNSCEEEKLKASLERIYNAAKIGNLCGAESIVLHAGFYQKSTKKH
TFESISKALKELTGQFRDEGIPAVLRPETMGKRTQFGTLEEVLALSAEIEGVMPCLDFCH
LHAREGKENSYSEFMEILSKVEESLGKEGLSNMHMHVSGVEYGTSGEKRHLTLKESDLNY
PELLKALKEFKARGRVILESPILEEDALMLRMLYNEI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaaaagatctacttttcggaaccgcaggaatcccgagaagcacaaaaggaaca
ggcagtgtctcaggaatcaaaaggatccgggaacttggccttgactgtatggagcttgaa
tttgttcagggagtgcgcatgagcgaaaaaggggcaaaaaacgtcctggaagctgcaaat
aacgaagaagtggccctgagcgtccatgccccgtattacatcaacctgaattcttgtgaa
gaggaaaaattaaaagccagcctggaaaggatttacaatgccgcaaaaataggcaacctc
tgcggagctgaatcaatcgtattgcatgccggattttatcagaaaagtaccaaaaaacac
acctttgagagcatatcaaaagctctaaaagaacttaccggacaattccgggatgaagga
atccctgcagtcctgcggcctgaaacgatgggcaagcgtacgcaatttggaacgcttgaa
gaagtacttgcgctaagtgcagagatcgaaggggtcatgccttgccttgatttttgtcat
ctgcatgcaagggaaggtaaagaaaattcttattccgagtttatggaaattctatcaaaa
gtagaggaaagccttggaaaggaagggctctcgaacatgcacatgcatgtctcaggagtt
gagtacggcacgagcggagaaaaaaggcatctgactctgaaagaatccgacttaaattat
cccgagcttctgaaggccttaaaagaattcaaagccagaggaagggtcatacttgagagt
cctattcttgaagaagacgcacttatgctgaggatgctttataacgaaatataa
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