KEGG   Methanosarcina vacuolata: MSVAZ_1620
Entry
MSVAZ_1620        CDS       T03815                                 
Name
(GenBank) Endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
mvc  Methanosarcina vacuolata
Pathway
mvc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mvc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MSVAZ_1620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mvc03400]
    MSVAZ_1620
Enzymes [BR:mvc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     MSVAZ_1620
DNA repair and recombination proteins [BR:mvc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     MSVAZ_1620
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: AKB43889
UniProt: A0A0E3Q3G2
LinkDB
Position
2057564..2058397
AA seq 277 aa
MPSKDLLFGTAGIPRSTKGTGSVSGIKRIRELGLDCMELEFVQGVRMSEKGAKNVLEAAN
NEEVALSVHAPYYINLNSCEEEKLKASLERIYNAAKIGNLCGAESIVLHAGFYQKSTKKH
TFESISKALKELTGQFRDEGIPAVLRPETMGKRTQFGTLEEVLALSAEIEGVMPCLDFCH
LHAREGKENSYSEFMEILSKVEESLGKEGLSNMHMHVSGVEYGTSGEKRHLTLKESDLNY
PELLKALKEFKARGRVILESPILEEDALMLRMLYNEI
NT seq 834 nt   +upstreamnt  +downstreamnt
atgccctcaaaagatctacttttcggaaccgcaggaatcccgagaagcacaaaaggaaca
ggcagtgtctcaggaatcaaaaggatccgggaacttggccttgactgtatggagcttgaa
tttgttcagggagtgcgcatgagcgaaaaaggggcaaaaaacgtcctggaagctgcaaat
aacgaagaagtggccctgagcgtccatgccccgtattacatcaacctgaattcttgtgaa
gaggaaaaattaaaagccagcctggaaaggatttacaatgccgcaaaaataggcaacctc
tgcggagctgaatcaatcgtattgcatgccggattttatcagaaaagtaccaaaaaacac
acctttgagagcatatcaaaagctctaaaagaacttaccggacaattccgggatgaagga
atccctgcagtcctgcggcctgaaacgatgggcaagcgtacgcaatttggaacgcttgaa
gaagtacttgcgctaagtgcagagatcgaaggggtcatgccttgccttgatttttgtcat
ctgcatgcaagggaaggtaaagaaaattcttattccgagtttatggaaattctatcaaaa
gtagaggaaagccttggaaaggaagggctctcgaacatgcacatgcatgtctcaggagtt
gagtacggcacgagcggagaaaaaaggcatctgactctgaaagaatccgacttaaattat
cccgagcttctgaaggccttaaaagaattcaaagccagaggaagggtcatacttgagagt
cctattcttgaagaagacgcacttatgctgaggatgctttataacgaaatataa

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