Mannheimia varigena USDA-ARS-USMARC-1388: X875_15730
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Entry
X875_15730 CDS
T03029
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mve03110
]
X875_15730
Chaperones and folding catalysts [BR:
mve03110
]
Heat shock proteins
HSP100
X875_15730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
zf-C4_ClpX
ClpB_D2-small
AAA_5
RuvB_N
Mg_chelatase
AAA_22
AAA_18
AAA_7
AAA_16
AAA_14
MCM
Sigma54_activat
AAA_28
AAA_24
AAA_33
ResIII
IstB_IS21
DUF4428
T2SSE
Sigma54_activ_2
nSTAND3
DEAD
TsaE
AAA_3
NACHT
TIP49
ABC_tran
RNA_helicase
AAA_PrkA
AAA_17
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AHG80191
LinkDB
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Position
1661552..1662799
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AA seq
415 aa
AA seq
DB search
MAFEKEPHCSFCGKKRTEVDQLVEGTEGYICNECIEESYALLHGEEEPLIDENQDDDASF
FTNVPTPHELHEHLDDYVIGQEHAKKVLSVAVYNHYKRLRSALSNHEATNGVELGKSNIL
LIGPTGSGKTLLAETLARRLNVPFAVADATTLTQAGYVGEDVENVIQKLLMKCDFEAEQA
ERGIVFIDEIDKITRKSESASITRDVSGEGVQQALLKLLEGTVANINPQGGRKHPKGETI
PVDTSKILFICGGAFAGLDKIVESRTNTQGGIGFGAALKKDKDRQDLTELFKQVEPEDLV
KFGLIPELIGRLPVVTPLQELDEEALIQILTEPKNAIIKQYQALFQMEGVELHFTKEALI
AIAGKAIARKTGARGLRSIVENLLLDTMYDLPTLNAKKVTIGKGCVENGDKPKVE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgaaaaagaaccacactgtagtttttgcggtaaaaaacgcactgaggtcgat
caattagtagaaggcactgaaggctatatttgtaacgaatgtatcgaggaatcgtacgcc
ctattgcacggcgaagaagaacctttaattgatgaaaatcaagatgatgatgcaagcttt
tttaccaatgtgccaacaccacacgaattacacgagcatttagatgattatgttatcggg
caagaacatgctaaaaaagtgctttctgtagcagtttacaatcactataaacgtttaaga
agtgcattatcaaatcatgaagcaaccaatggtgttgagctaggtaaaagtaatatcctg
ttaattggtcctactggtagcggtaaaactttactggccgaaaccctggctcgccgttta
aatgtgccgtttgcggtggcagacgcgactactcttacccaagccggttatgtgggcgaa
gacgtggaaaacgtgattcaaaagttactgatgaaatgcgattttgaagcggaacaagct
gagcgtggtattgtctttattgatgaaatcgacaaaatcacccgcaaatcggaaagtgct
tcaattacccgagatgtttcgggtgaaggcgtgcaacaagcactgttaaaactgcttgaa
ggcacggtggctaatatcaatccgcaaggtggtcgtaagcacccgaaaggcgaaactatt
ccggtagatacctccaaaatcctgtttatttgtggtggtgctttcgcaggcttagataaa
attgtggaatctcgcactaacacccaaggcggaataggctttggtgcagcattgaagaaa
gataaagatcgccaagatttaactgaattattcaaacaagttgaacctgaagatttggta
aaattcggcttaattcctgagttaatcggtcgtttacctgtagttacgccactacaagag
ttagacgaagaagccttgattcagatcttaaccgagcctaaaaatgcaattatcaagcaa
taccaagccttattccaaatggaaggcgtagaattacacttcaccaaagaagccttaatt
gctattgcaggtaaagccatcgcccgcaaaactggagctcgtggtttacgctcaatcgta
gagaacttgttgcttgatacaatgtacgacctaccaacacttaatgcgaaaaaagtaact
atcggtaaaggttgtgtagaaaatggcgacaaaccgaaggtggaatag
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