Mycolicibacter virginiensis: MJO54_03580
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Entry
MJO54_03580 CDS
T08150
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mvm
Mycolicibacter virginiensis
Pathway
mvm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MJO54_03580 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvm03400
]
MJO54_03580 (recD)
Enzymes [BR:
mvm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MJO54_03580 (recD)
DNA repair and recombination proteins [BR:
mvm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MJO54_03580 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Helicase_RecD
AAA_22
Viral_helicase1
UvrD-helicase
AAA_16
SH3_13
PhoH
T2SSE
nSTAND3
AAA_28
ATPase
Mg_chelatase
NTPase_1
TrwB_AAD_bind
SRP54
AAA_29
AAA_5
MukB
SLFN-g3_helicase
NACHT
CbiA
DEAD
DO-GTPase1
Motif
Other DBs
NCBI-ProteinID:
ULP48250
LinkDB
All DBs
Position
complement(731289..733028)
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AA seq
579 aa
AA seq
DB search
MSELLEWRVASGGTGLLRDFNQAGVLDAADVHAAQRITALGGEPDETVGLALALTVRALR
HGSVCLDLSTVAADTDAAEVAWPEPEPWLAAVRDSRLVQAQVLRLYDGRLLYLDRYWREE
EQVCTDLLALSAPGTAPAELPAFERLFPSGKFDEQRAAAEIALSQSVTVLTGGPGTGKTT
TVARLLALLAEHAERSGTPGLRIALAAPTGKAAARLTEAVAAEVAELAPVDQARLAGLGA
TTLHTLLGSRPDSSVRFRHDRANRLPHDVIVVDETSMVSLTLMARLLEAMRPDARLILVG
DADQLASVEAGAVLADLVDGLAARPDTRVATLRTSHRFGESIGALAVAIRDGDADKAVAL
LAAGGEHVEWIDTDSAVDVAERLAALVVPHALAVRQAALLGDAAAASATLDEHRLLCAHR
AGLHGVQHWNQQIRRWVAEQTGDPMWTEWYAGRPLLVTANDYGLGLRNGDTGAVVVRNEG
LRAVIATASGPLEFATSRLADVETMYAMTIHKSQGSQAGEVTVLMPPVESRLLTRELFYT
AVTRAKSKVRVVGSEASVRAALGRRVVRASGLALRLREA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagttgttggagtggcgggtggcctccggcggcactgggctgttgcgggacttc
aatcaggccggtgtgctggatgccgccgatgtgcacgcggcccaacgcatcacggcactg
ggcggcgagcccgacgagacggtgggcttggcgctggcgctgaccgtgcgcgccctgcgg
cacgggtcggtgtgcctggatctgtcgacggtggccgccgacaccgacgccgcggaggtg
gcctggccggagccggagccatggctggcggcggtgcgggacagtcggctggtgcaggcg
caggtgctgcggctttatgacggccggctgctctacctcgatcggtattggcgcgaggag
gagcaggtctgcacggacctgctggcgttgtcggcgcccgggacggcgccggcggagctg
cccgcctttgagcgactttttccgtccggcaagttcgatgagcagcgtgcggccgccgaa
atcgcactgtcgcagtcggttacggtgctcaccggtgggccgggcaccggcaagacgact
acggtggcgcggctgttggcgctgttggccgagcatgccgaacggtcgggcacgcccggg
ctgcggatcgcgttggccgccccgaccggtaaagcggcggcccggctgaccgaggccgtc
gccgcggaggtggccgagctggcgccggtggatcaggcgcggctcgccgggctgggcgcg
accacgttgcacaccctgctgggttcgcggccggacagctcggtgcggttccgccacgat
cgggccaatcggctgccgcacgatgtgatcgtcgtcgacgagacatcgatggtgtcgctg
acgctgatggcccggctgctggaggcgatgcgcccggatgcccggctgattctggtgggc
gacgccgaccagctggcgtcggtggaagccggtgcggtgctggccgatctggtggacggg
ctggcggcgcggcccgacacccgggtggcgacgctgcgcacgtcgcaccggttcggcgag
tcgatcggtgcgctggcggtggcgatccgcgacggcgacgccgataaggcggtcgcgctg
ctggccgccgggggcgaacacgtggagtggatcgacaccgacagcgctgtggacgtggcc
gagcgactggcggcgctggtggtgccgcacgcgctggcggtgcgccaggccgcgctgctc
ggtgatgccgcggcggcctcggcgacgttggacgagcatcggttgttgtgtgcgcaccga
gcgggcctgcacggagtgcagcactggaaccagcagatccgccggtgggtggccgagcag
accggtgacccgatgtggaccgagtggtacgccggccgaccactactggtgaccgccaac
gactacgggctcgggttgcgcaacggcgacaccggagcggtggtggtccgcaacgagggg
ctgcgcgcggtgatcgcgacggcatccgggccgctggagttcgcgaccagccggctcgcc
gacgtcgagaccatgtacgcgatgacgatccataagagccagggcagccaggccggcgaa
gtgaccgtgttgatgccgcccgtcgagtcacggctgttgacccgggagttgttctacacc
gcggtgacccgggccaagtcgaaagtgcgcgtggtgggctcggaggcctcggtgcgggcc
gcgctgggccgccgggtggtgcgggcgtccgggctggcgctgcggctgcgggaggcgtga
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