Mannheimia sp. USDA-ARS-USMARC-1261: X781_18290
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Entry
X781_18290 CDS
T03026
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mvr
Mannheimia sp. USDA-ARS-USMARC-1261
Pathway
mvr03420
Nucleotide excision repair
mvr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
X781_18290
03430 Mismatch repair
X781_18290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvr03400
]
X781_18290
Enzymes [BR:
mvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
X781_18290
DNA repair and recombination proteins [BR:
mvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
X781_18290
MMR (mismatch excision repair)
Other MMR factors
X781_18290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
NolB
Motif
Other DBs
NCBI-ProteinID:
AHG73976
UniProt:
W0Q605
LinkDB
All DBs
Position
complement(1859578..1861782)
Genome browser
AA seq
734 aa
AA seq
DB search
MIMDFSLLLDGLNDKQREAVAAPIGNYLVLAGAGSGKTRVLTHRIAWLIGVENIPESNIL
AVTFTNKAAAEMRHRIEHTLSQSGDNRLFGMWVGTFHSIANRLLRSHYLDADLPKDFQIM
DTEDQQRLLKRLLKLHNIDEKHFPPKHVAWYINAQKDKGKRAKDIEHHNDPNEKKLVEIY
QIYQEACDRAGLLDFAELLIRTYELFKRKPAILQRYQQRFQQILIDEFQDTNNIQYDLIR
LLAGDVGKVMIVGDDDQSIYGWRGAQVENIQRFLNDYDNAQTIRLEQNYRSTGNILSCAN
ELIANNDNRLGKNLWTDSGDGEPVDIYCAFNELDEARFVASQIKQWKEDEGDLAECAVLY
RSNSQSRVIEEALIQANIPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVINTP
TRGIGDRTLDTLRQITRNRQITLWQAIQVAVQEEQLSGRAASSLLRFVELINALDQETEQ
MSLAEQTDYVIKKSGLYEMYKQEKGEKGEVRIENLEELVTATKQFVKPDEAEDLTDLTAF
LTHASLEAGEAQASQHEDYVELMTLHSAKGLEFPRVFMVGVEEGIFPSGMSFDEGRLQEE
RRLAYVGITRAKKKLTISYAESRRLYGKEERHIPSRFIAELPEEHIREVRLRGSINRAAS
FNQSSAFAKNPAKTTASILNDDSWKMGQKVNHAKFGQGTIINVEGSGEATRLQVAFVGNG
IKWLIAKMANLEKL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
gtgattatggatttttcattattattagatggtttaaatgacaagcagcgagaggctgtt
gctgcaccaatcggcaattacttggttctggcgggagccggttcgggcaaaacaagggtt
ttaactcaccgcattgcgtggttaattggcgtggaaaatataccggaatcaaacattctc
gccgtaacttttaccaataaagctgctgcagaaatgcggcaccgtattgagcataccctt
tcccaatcaggcgataaccgcctgtttggtatgtgggtaggcacttttcatagtattgct
aatcgtttattacgctcccattacttagatgccgatttaccgaaagatttccaaattatg
gataccgaagatcagcagcgtttgctcaaacgcttgctgaaactacacaatattgatgaa
aaacatttcccgccgaaacacgttgcttggtatatcaatgctcaaaaagataagggaaaa
cgagccaaagatatcgaacaccataacgatccaaatgagaaaaaactggttgagatttat
cagatctaccaagaggcgtgcgaccgtgcaggcttattggattttgccgagctgcttatt
cgaacttatgagttattcaaacgcaaacctgcgattttgcagcgttatcaacaacgcttt
cagcagattttgatcgatgagttccaagacaccaacaacattcagtacgatcttattcgc
ttattagcaggtgatgtcggcaaagtgatgatcgtgggcgatgatgatcaatcgatctac
ggttggcgtggagctcaggtggagaatattcagcgtttcttgaacgattatgacaatgct
caaaccattcgtttggagcaaaattaccgttccaccggcaatattttaagctgtgccaat
gaattaattgccaataatgataaccgcttgggcaaaaatttatggacagatagtggtgat
ggcgaacccgtagatatttactgtgccttcaatgagttggacgaagcccgctttgtcgcc
tctcaaatcaaacaatggaaagaggacgagggcgatcttgccgaatgtgcggtgctttac
cgtagcaacagccagtcccgtgtgattgaggaagccttaattcaagccaatattccgtac
cgcatttacggcggaatgcgattctttgaacgccaagagatcaaagacgcgttggcgtat
ctgcgtttgattgccaaccgccaggacgatgctgcatttgagcgtgtgattaacacccca
accagaggtattggcgacagaaccttagacacgcttcgccaaattactcgaaaccgccaa
attaccttatggcaagccattcaagtggcagtgcaggaagaacaactttcaggcagagcg
gcttcttcgttgctccgctttgttgaattgattaatgccttagatcaagaaaccgagcag
atgtctttagctgagcaaaccgattatgtaattaaaaaatcgggcttgtatgaaatgtac
aaacaagaaaaaggcgagaaaggtgaagttcgtattgaaaacttagaagagctagtaact
gccactaaacagtttgttaaacctgatgaagcagaagatttaactgatctcactgccttt
ttaactcacgcatcccttgaagccggtgaagctcaagcctctcaacacgaagattatgtg
gagctaatgacattacactcagcgaaaggcttagaattcccacgtgtatttatggtgggt
gtggaagaagggattttcccaagtggaatgagttttgatgaaggcagattgcaagaagaa
cgtcgcttggcgtatgttggcattactcgagcgaagaaaaagctcactatcagctatgcg
gaatcccgccgtttatacggcaaggaagaacgtcatataccttctcgctttattgccgag
ttaccggaagaacatattcgtgaagtgcgtttaagaggttcaattaatcgtgcggcgagt
tttaatcaatcttctgcatttgcaaaaaatccagcaaaaacgaccgcttccatcttaaat
gatgatagctggaaaatgggacagaaagtaaatcacgccaaattcggacaaggtacgatt
atcaatgtggaaggttcaggcgaagcaacccgtttacaagtggcattcgtcggtaatggg
ataaaatggctgattgcaaaaatggcaaatttagagaagctataa
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