Mizuhopecten yessoensis (Yesso scallop): 110460651
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Entry
110460651 CDS
T05079
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110460651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myi03400
]
110460651
DNA repair and recombination proteins [BR:
myi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110460651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
IF-2
Motif
Other DBs
NCBI-GeneID:
110460651
NCBI-ProteinID:
XP_021369359
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MALQPKQELQLDGIQEQGFLSFHRSLPEKSSTTLRVFDRNDYYTVHGSDAVFVAKDVYKT
AGVIKMLGAGEKKLESVVLSKMNFESLVRDLLLVRQYRVEVYRNKGGSKNNDWSLAFKAS
PGNLTQFEEILFGNTDMSTSAGVIAVKIGTDTGQRQVGVGYADATLRKFMVSEFMDNDQF
SNLEALIVQLGPKECLIMSGEIGADAGKLKQVLDRSGLLVTERKKSDFSSKDVIQDLNRL
LKFKKGEQGNSASLPETEKAQAMTSLSALIKYLELLSDEENFGQFSLSLFDLGQYMKLDA
AAVRALNLLPSTVEGGNKNQSILGLLNKCKTAQGQRLLSQWVKQPLVDLNKIEERLNVVQ
VFVEDTELRQTLQDEQLRKIPDFQRLAKKFQRKRATLQDCYRVYQAIDKMPYLLEVLEKH
EGEHQSLLMELFTNPAKELLMDFAKFQEMIETTMDLAQVESHDFVIKADFDEALAALREQ
IDELENNIKGQMNKVARDLGVEPNKVLKLESNSQLGYFFRVTRKEEKALRNNKNYTTIDT
KKDGVRFHNNAVRRMNEEFLKAKEDYNEQQKSVVAEIITIAAGYVEPMLLLNDIIAQLDV
LVSFAHVAVSAPIAYIRPKLFAKGSGKIQLTEARHPCLEMQDDVAFIPNDAGFTKDKQMF
HIITGPNMGGKSTYIRSVGVVVLMAQMGCYIPCAEGEITIADSILARVGAGDSQLKGVST
FMAEMLETASILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIKAFCLFATHF
HELTALSDVVPTVNNLHVTALTTNDTLTLLYRVKPGVCDQSFGIHVAELAHFPKNVIEFA
KNKASELEDFQNVCLSGTDLEGDSEPAVKKRKLVKEEGEDIIKDFLSKVKKLPLSSLSPD
EAIAELNKLKACVKEKNNPYVEDVISRGK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcaaccaaaacaagagttgcaactggatggcatacaagaacaaggatttctg
tcattccacagatccttaccagagaaatccagtaccaccctgagagtttttgacagaaat
gactactacaccgtccatggctcagatgctgtgtttgttgccaaggatgtgtacaaaact
gctggtgtcatcaaaatgcttggagcaggtgagaagaagctggagtctgtggtcctgagt
aaaatgaactttgagtcattggtacgagatctgttactggtacgacagtaccgtgtggag
gtataccgtaacaagggtggctccaaaaacaatgactggtcgctggcattcaaggcctcc
cccggtaacctgacacagtttgaagagatcctttttgggaacacagacatgtctacctct
gcaggggtcatagctgtaaagattggcactgacacaggccagcggcaagtaggagttgga
tatgctgatgctaccctcagaaaattcatggtcagcgagttcatggacaacgaccaattc
tctaaccttgaggcactgatagtccagttgggtccaaaggagtgtctcatcatgtctggg
gagatcggtgctgatgcaggcaaactgaagcaagtgctggaccgaagtggtctgctggtg
actgaacgcaaaaaatctgacttttcctcaaaggatgtcattcaagacttgaacaggcta
ttgaaatttaagaaaggagagcaagggaacagtgcatctctgcctgaaacagaaaaggca
caggccatgacctccctttcagctttgatcaagtatttagagctgttgtcagatgaagaa
aactttggtcaatttagtttgtccctgtttgatctgggtcagtacatgaagctggacgct
gcagcagtgagagccctcaaccttcttcccagcacagtcgaaggtggaaacaagaaccag
agtatacttggattactaaacaagtgtaagactgcccaaggtcaaaggttattgtcacag
tgggtcaaacaacctctggtagatcttaataaaatcgaggagcgcctaaatgtggtacaa
gtatttgtggaggacacagaactcagacagacattacaggatgagcagctaagaaaaatt
ccagatttccagagattagccaaaaagtttcagagaaagagagctacactacaagattgt
tacagggtgtaccaagccatagacaagatgccttacctgcttgaggtattagagaaacat
gaaggagaacaccagtcactacttatggagctgttcacaaacccggccaaggaattattg
atggattttgccaagttccaggaaatgatcgaaacaacaatggacctggctcaggtagaa
agccatgattttgtgatcaaagctgattttgatgaagcccttgcagcccttagagaacaa
attgatgagcttgaaaacaacatcaaaggccagatgaacaaggtggcaagagatttagga
gtagaaccaaacaaagtgctcaagcttgagagtaacagccagctgggatacttcttcagg
gtcacaaggaaggaagaaaaggctctgaggaacaacaaaaattacacgaccattgataca
aaaaaagatggagttcgtttccacaacaatgctgtgcgtcgcatgaatgaggaattcctg
aaggcaaaggaggattataatgagcaacagaagagtgtggttgctgagatcattacaata
gcagcgggatatgtggagccgatgctactgttgaatgacatcattgcccagttagatgtg
cttgtgagtttcgcccatgttgctgtttctgcaccgattgcttatatacgaccaaaactg
ttcgcaaaaggaagtggtaaaattcagttgacagaggcaagacacccttgcttagagatg
caggatgatgtggcattcatacccaatgatgctggtttcactaaagacaaacaaatgttc
catatcataactggtccaaatatgggaggaaaatctacatacatccgctctgtaggagtg
gtagtgttgatggcacagatgggatgctacattccgtgtgctgaaggggagatcaccatt
gcagacagcatactggcacgtgtcggagcaggggatagtcagcttaaaggcgtgtcaaca
ttcatggcagagatgttggaaaccgcctctatcctcaggtcagcaacagaagattctttg
ataatcatagatgagttaggaagaggaacatcaacttatgatgggtttggtctggcctgg
gcaatttctgaatatattgctaccaaaattaaggccttttgtctgtttgccacccacttc
catgagttgacagccctgtcagatgttgtgcctactgtcaacaacctgcatgtaacagca
ctcacaaccaacgacactcttaccctgctgtacagggtcaaaccaggtgtgtgtgaccaa
agctttggtatccatgtggcagagctggctcacttccctaaaaatgttatagagtttgcc
aagaacaaagccagtgagctagaggattttcagaatgtctgtctgtctggaacagatttg
gaaggcgattcagagccagctgtcaagaaacgcaaacttgtaaaagaggaaggtgaggac
atcatcaaagatttcctgtctaaagtgaaaaaattgccactgtcaagcttatctcctgat
gaggctatcgcagaactcaacaaacttaaggcctgtgtgaaggagaagaataatccttat
gttgaggatgtgatctcgaggggaaaatga
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