Mycobacterium intracellulare subsp. yongonense: OEM_35450
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Entry
OEM_35450 CDS
T02732
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
myo
Mycobacterium intracellulare subsp. yongonense
Pathway
myo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OEM_35450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myo03019
]
OEM_35450
03016 Transfer RNA biogenesis [BR:
myo03016
]
OEM_35450
Enzymes [BR:
myo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OEM_35450
Messenger RNA biogenesis [BR:
myo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OEM_35450
Transfer RNA biogenesis [BR:
myo03016
]
Prokaryotic type
tRNA degradation factors
OEM_35450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AGP65080
UniProt:
S4ZET2
LinkDB
All DBs
Position
complement(3794252..3796507)
Genome browser
AA seq
751 aa
AA seq
DB search
MSVAEIEEGVFEATATIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDENMLLSATTASK
SPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVSGLR
NEIQVVVTVMSLDPNDLYDVLAINAASASTQLSGLPFSGPIGGVRVALIDGQWVAFPTVE
QLERAVFDMVVAGRKVDGDVAIMMVEAEATENVIELVEGGAQAPTETVVAEGLEAAKPFI
ATLCTAQEELAGAAAKPVGEFPTFPDYAEDVYYSVASVATDELAKALTIGGKAERDARTD
ELKAEVLARLTGDSGTYEGREKEVSAAFRSLTKKLVRQRILTDHFRIDGRGITDIRALSA
EVAVVPRTHGSALFQRGETQILGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPFSTGE
TGRVGSPKRREIGHGALAERALIPVLPGVEDFPYAIRQVSEALGSNGSTSMGSVCASTLS
LLNAGVPLKAPVAGIAMGLVSDDVEIDGRTERRFVTLTDILGAEDAFGDMDFKCAGTKDF
VTALQLDTKLDGIPSQVLAGALGQAKDARLTILEVMAEAIDAPDEMSPYAPRVTTIKVPV
DKIGEVIGPKGKVINGITEETGAQISIEDDGTVFVGATDGPSAQAAIDRINAIANPQLPT
VGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADI
DKRGKISLVLVEDDNSAPADAPAAAPADAAS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgctgaaattgaagagggcgtgttcgaggcgaccgccaccatcgacaacggg
agcttcggcacccgcaccatccgtttcgagaccggccggctggcccagcaggccgccggc
gccgtggtcgcgtacctggatgacgaaaacatgctgttgtcggcgaccaccgccagcaag
agccccaaggagcacttcgacttcttcccgctgaccgtcgacgtggaggagcggatgtac
gccgccggtcgcatccccggctcgttcttccgtcgcgagggccgtccctccaccgacgcg
atcctgacctgccggctcatcgaccgcccgctgcgcccgtcgttcgtcagcgggctgcgc
aacgagatccaggtcgtggtcacggtcatgagcctggaccccaacgacctgtacgacgtg
ctggcgatcaacgccgcgtcggcctccacccagctgagcgggctgccgttctcgggtccg
atcgggggcgtgcgggtcgcgctcatcgacggccagtgggtggcgttcccgaccgtcgag
cagctcgagcgggcggtgttcgacatggtggtggccggccgcaaggtggacggggacgtc
gcgatcatgatggtcgaggccgaggccaccgagaacgtcatcgagctcgtcgagggcggc
gcccaggcgccgacggaaaccgttgtggccgaagggctcgaggccgccaagccgttcatc
gccaccctgtgcaccgcgcaggaggagctggccggggcggccgccaagccggtcggcgag
ttcccgacgttcccggactacgccgaagacgtctactactcggtcgcctcggtggccacc
gacgagctggccaaggcgctgaccatcggcggcaaggccgagcgcgacgcgcgcaccgac
gagctgaaagccgaggtgctcgcgcggctcactggggactctgggacctacgagggccgc
gagaaagaggtcagcgccgcgttccgctcgctgaccaagaagctggtgcgccagcgcatc
ctcaccgatcacttccgcatcgacggccgcggcatcaccgacatccgcgcgctctcggcc
gaggtcgccgtggtgccccgcacgcacggcagcgcgctgttccagcgcggtgagacccag
atcctgggcgtgaccacgctcgacatggtcaagatggcccagcagatcgactcgctgggg
cccgagacctccaagcgctacatgcaccactacaacttcccgccgttctccaccggcgag
acgggccgggtgggttcgcccaagcggcgcgagatcgggcacggcgcgctcgccgagcgg
gccctgatcccggtgctgcccggcgtcgaggatttcccgtacgccatccgccaggtctcc
gaggcgctgggctccaacggctcgacgtcgatggggtcggtctgtgcgtccaccctgtcg
ctgctgaacgccggtgtgccgctgaaggcgccggtggccggcatcgcgatgggcctggtc
tccgacgacgtcgagatcgacggccgcaccgagcgccggttcgtcacgctgaccgacatc
ctgggcgccgaggacgcgttcggcgacatggacttcaagtgcgccggcaccaaggacttc
gtcaccgcgctgcagctggacaccaagctcgacggcatcccgtcgcaggtcctggcgggc
gccctgggccaggccaaagacgcgcgcctgacgatcctcgaggtcatggccgaggccatc
gacgcgcccgacgagatgagcccctatgccccgcgggtcaccaccatcaaggttccggtg
gacaagatcggtgaggtcatcggccccaagggcaaggtcatcaacggcatcaccgaggag
accggcgcgcagatctccatcgaggacgacggcaccgtgttcgtcggcgccaccgacggg
ccctcggcgcaggccgcgatcgaccggatcaacgccatcgccaacccgcagctgccgacg
gtcggcgaacgtttcctcggaaccgtggtcaagacaacggatttcggcgcgttcgtctcg
ctgctgcccggtcgcgacggcctggtgcacatctccaagctcggcaagggcaagcgcatc
gcgaaggtcgaggacgtggtgaacgtcggcgacaagctgcgcgtcgaaatcgccgacatc
gacaagcgcggcaagatttcgctggtgctggtggaggacgacaactcggcgcccgccgat
gccccggcggccgcccctgccgatgccgcgagctga
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