Mycobacterium intracellulare subsp. yongonense: OEM_49310
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Entry
OEM_49310 CDS
T02732
Name
(GenBank) RNA polymerase factor sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
myo
Mycobacterium intracellulare subsp. yongonense
Brite
KEGG Orthology (KO) [BR:
myo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myo03021
]
OEM_49310
Transcription machinery [BR:
myo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OEM_49310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
SnoaL_4
Sigma70_r4
NTF2
SnoaL_3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AGP66466
UniProt:
S4ZGW4
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All DBs
Position
5200850..5201857
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AA seq
335 aa
AA seq
DB search
MSLLAQDPEGDAVLGTDFSAQAEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKSYDR
FEGKSSLRTWLHRIATNTCLSALEGKGRRALPVGLGAPSSDPTAELVERREVPWLEPLPE
LTDHPADPSVVVGSRESVRLAFVAALQYLPPRQRAVLLLRDVLQWRSAEVAEAVGTTTTA
VNSLLQRARSQLDAVGPSADDQLAPPDSPEAQDLLARYIAAFETYDIDRLVELFTAEAIW
EMPPYAGWYRGAADIVTLIHQQCPAEAGGDMRLLPLVANGQLAAAMYMRAGDVHVPFQLH
VLDVHGEKVSHVVAFLDETLFTKFGLPGSLSAGQE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcttctcgcccaagaccccgaaggcgacgcggtgctggggaccgatttctcggcc
caggccgagccctatcgccgcgagctgctcgcccactgctatcgaatgaccgggtcgctg
cacgacgccgaagatctggtgcaggagacgttgctgcgggcctggaagtcctacgaccgt
ttcgaaggcaagtcctcgctgcggacctggctgcaccgcatcgccaccaacacctgcctg
agcgcgctggagggcaaggggcgcagggcgttgccggtgggcctgggcgccccgagctcg
gacccgaccgcggagctggtggagcgccgcgaagtgccctggctcgagccgctgccggag
ttgaccgatcacccggcggacccgtcggtggtcgtcgggtcgcgggagtcggtacggctg
gcgttcgtggctgcgctgcaataccttccgccgcggcagcgggcggtgctgctgctgcgc
gacgtgctgcagtggcgctccgccgaggtcgccgaggcggtcggcaccaccacgaccgcc
gtcaacagcctgctgcagcgggcccggtcgcaactggatgccgtcggtcccagcgccgac
gaccaactggcgccgccggattcgcccgaggcccaagacctgctggcccgctacatcgcc
gcgttcgagacctacgacatcgaccgcctggtggagttgttcaccgcggaggcgatctgg
gaaatgccgccgtacgccggctggtatcggggcgctgcggacatcgtgaccctgatccac
cagcaatgcccggccgaggcgggcggagacatgcggctgctgccgctggtcgccaacggt
cagctcgccgccgcgatgtacatgcgcgccggcgacgtgcacgtccccttccagttgcat
gtgctggatgtgcacggcgagaaggtgtctcacgtggtggcgttcctcgatgagacgttg
ttcacgaagttcgggctgcccggttcgctgtccgccggtcaggagtaa
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