Maylandia zebra (zebra mbuna): 101486994
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Entry
101486994 CDS
T02814
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101486994 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mze03021
]
101486994 (polr1b)
Enzymes [BR:
mze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101486994 (polr1b)
Transcription machinery [BR:
mze03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101486994 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Birna_RdRp_palm
Motif
Other DBs
NCBI-GeneID:
101486994
NCBI-ProteinID:
XP_024660451
LinkDB
All DBs
Position
LG13:24928023..24936683
Genome browser
AA seq
1134 aa
AA seq
DB search
MDFSSKWSDLPKGPSLKNLTDGSFGHMKDTQHAAIQDLTKAHIESFDQAVTDGLNRVVQS
IPPLEFMFKNERISLGFVEAAIQNPVVAKGNICKEMKVFPAECRGRRCSYKGKIVADVSW
SINGVPKGIIKQSLGHVPIMVKSKLCNLHGMSPKELVEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMSRPKWKNRGQGYTQYGISMRCVREEHTAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKTCVSEMLRIVMEENCTTRSKV
LNYLGERFRVKMNLPEWYTNEQCANFLLNECICIHLKSDVEKFYLLCLMTRKLFTFAKQE
CMEENPDSIVCQEVLTPGQLYLMFLKERLTAWLVSVKLSFDKRGSKVTGGWSSEMMIKML
NMGTDLTRPFEYLLATGNLQSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVALTLSTTSLPALLCSLGVT
PVDGTPGRAFADCYPVVLDGAVVGWVEADLAPVVVESLRRFKVLREKKIPPWTEIVLVPK
TGKASLYPGLFLFTTPCRMVRPVQNLAFGKQELIGTFEQLYINVGILENEIEPRVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQTPQSP
LVRPYMYDHYGLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LAEKVKGEDGVVFGTKPGDPKVKEKLDADGLPFIGSVLQYGDPFYSYINLNTGQTFISYY
KSQEACIVDNIKVCSNDGGSGRFKRVCITVRMPRNPTIGDKFASRHGQKGILSRLWPTED
MPFTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLGHDATPFTFSEENSALDY
FGELLRAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNVQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPPYWSSMRHRKTVCTLCGKSDSVDSVSVPYVFRYFVAELAAMNIKVKLEVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggatttttcaagtaagtggagtgatcttcccaaaggtccgagtctgaaaaatctgaca
gatggaagctttggccacatgaaggacacccagcatgctgccattcaggatctgaccaaa
gctcacatcgagtcgtttgaccaggcagtcacagacggactcaaccgcgttgtgcagtcc
atcccccccttagagttcatgttcaaaaatgaacggatcagccttggtttcgttgaagct
gccatccaaaacccagtggttgccaaagggaacatctgcaaggaaatgaaggtgttccca
gcagagtgccggggaagaagatgctcgtacaaagggaaaatagtggcagacgtcagctgg
tcgatcaatggagttcccaaaggcatcatcaagcagtctctgggtcatgtgcccatcatg
gtgaagtccaagctgtgtaacctgcatggcatgtcccccaaagagcttgtagagcatcac
gaagaagccgaggaaatgggaggttatttcattgtgaatggaattgagaaggttatccgc
atgctgataatgccaaggaggaactatcctatcgccatgtcaagacccaagtggaagaac
aggggtcagggttacactcagtacggtatttctatgcgttgcgtgagggaggagcacaca
gccatcaacatgaacctgcattatctggaaaatggaactgtgatgctgaacttcatctac
cagaaagagctcttcttcctcccactaggctttgcattaaaggctctggtggacttcaca
gacttccagatctaccaggagctgatcaaaggccgcgaggacaattctttctacaagacc
tgtgtgtccgagatgctgcgcatcgtcatggaggagaactgcaccacccgcagcaaggtg
ctcaattacctcggagagcgcttcagggttaagatgaacctccctgagtggtacacaaat
gaacagtgtgccaacttcctgttaaatgagtgtatctgcatccacctgaagtcagacgtg
gagaagttctacttgctctgtctgatgacgaggaagctcttcacttttgccaagcaggag
tgcatggaagaaaaccccgacagtatcgtgtgccaggaagtgctcactcctggtcagctc
tacctcatgtttctgaaggagagactgactgcatggctggtgtctgtgaagctgtccttt
gacaagagaggcagcaaagtgaccggaggatggagctctgaaatgatgataaagatgctc
aacatgggaactgacttgaccagaccatttgaatatctgctggccactggaaacctccag
tctaagacaggtctgggcatgctgcagaacaccgggctgtgcgttgtagctgacaagctc
aacttcattcgctacctgtctcacttccgctgcgtgcacagaggagcagcgttcgctaag
atgaggaccacctctgtgcgtaagctgctgcccgagtcctggggcttcctgtgtcctgtc
cacactccagacggcgagccttgcggactcatgaaccacatgacagccagctgtgaaatt
gtggcattgaccttgtccaccacgtcactgcctgctctgctctgttcgcttggtgtcact
cctgtggatggaactcctggtcgggcctttgcagactgctaccctgtggtcctggacggt
gctgttgttggctgggtggaggctgacttggctccagttgtggttgaatcactgcgcagg
ttcaaggtgttaagagagaagaagattcctccctggacagagattgtcctggttcccaaa
acaggcaaggccagcttatatccaggcctgttcctcttcacaacaccttgtcgcatggtg
cggcctgtacagaacttggcttttggcaagcaagagttgattggcacctttgaacagctt
tacatcaatgtcggaatcttggagaatgagattgaaccaagagtaaccacacaccaggag
ctcttccctcacagtatgctcagtgtggtggcaaacttcatcccatactctgaccacaac
cagagtcccaggaacatgtaccagtgtcagatgggtaagcagactatgggcttcccgcta
cactctttcatggatcgctctgataacaagctgtaccggctccagaccccacagagccca
ctagtcaggccttatatgtacgaccactacggcctcgacaactaccccagcggcaccaac
gccatcgtggccgtcatatcctacacaggctacgacatggaagatgccatgattgtgaac
aagtcgtcatgggagagaggctttgcccatggaagtatctacaagacggagctggtggac
ctggcagagaaggtgaagggagaagacggcgtggtgtttggaaccaagccaggcgacccc
aaagtgaaagaaaaactagacgctgatggactgcccttcatcggatcggtgcttcagtat
ggagaccctttctacagctacatcaacctcaacactgggcagacctttatctcctactac
aagagtcaggaggcctgtattgttgacaacataaaggtctgcagtaatgacggcggctca
ggccgcttcaagcgcgtgtgcatcactgtacgaatgccccgaaatcccaccatcggtgac
aagtttgccagccgccacggacagaagggcatcctgagccgcctgtggccgacggaggac
atgcccttcaccgagagcggcatgactccggatatcctgttcaacccccacggcttcccc
tcccgtatgacaattgggatgctcatcgagagcatggccggcaagtcgggcgccctgcac
ggcctcggccacgacgccacacccttcaccttttccgaggagaactcggcgctcgattac
tttggcgagctgcttcgggcgggcggctacaactactacggtacggagcggctgtacagc
ggactgagcggtcaggagctagaggcagacatcttcatcggcgtggtctactaccagcgg
ctacgtcacatggtctccgacaagttccaagttaggacgacaggagcacgagacaaagtg
accaaccagcccgtaggaggaaggaacgtgcagggaggcatccgtttcggggagatggag
cgagacgccctgctggctcacggctcttcattcttacttcacgatcgcctcttcaactgc
tcagaccgctcagtggctcaggtgtgcgttgactgtggcagccttctctcccctttgttg
gagaaaccgccgccctactggtcatccatgcgccaccgtaagactgtctgcaccctgtgt
ggcaaaagtgactctgttgactcggtgtctgttccttatgtcttccgctactttgtagct
gagcttgctgcaatgaacatcaaagtcaaattagaagtcaagtga
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