Nisaea acidiphila: NUH88_16815
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Entry
NUH88_16815 CDS
T08369
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
naci
Nisaea acidiphila
Brite
KEGG Orthology (KO) [BR:
naci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
naci03021
]
NUH88_16815 (rpoH)
Transcription machinery [BR:
naci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NUH88_16815 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_19
UCR_14kD
HTH_11
HTH_25
Motif
Other DBs
NCBI-ProteinID:
UUX49054
UniProt:
A0A9J7APG8
LinkDB
All DBs
Position
complement(3603978..3604865)
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AA seq
295 aa
AA seq
DB search
MAQATLPTLTAEGNLTRYLQEIRKFPMLKPEEEYMLAKSWREHEDSEAAHKLVTSHLRLV
AKIAMGYRGYGLPLAELISEGNVGMMQAVKRFDPERGFRLATYAMWWIRAAIQEYILHSW
SLVKIGTTAAQKKLFFNLRKLKGQMQAIEEGDLSPERVTAIAEKLDVPEQDVINMNRRLS
APDHSLNAPLRVEGEGEWQDWLVDEHESQEEQYAESEELEQRRKLLSVGMEALNERERHI
LTERRLKENPTTLEDLSQEYDISRERVRQIEVRAFEKLQKAMRNAAIEQRLETAS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcgacacttccgacgcttacggctgaaggcaaccttacccgctatctgcag
gaaattcgcaaatttccgatgctgaagccggaagaggaatacatgctcgccaaaagctgg
cgcgagcatgaggattccgaggccgcccacaagctggtcacgagccatctccgcctcgtc
gccaagatcgcgatgggctatcgcggctacggcctgccgctggcggagctgatctcggaa
ggcaatgtcggcatgatgcaggcggtcaagcgcttcgatccggagcgcggcttccgcctc
gccacctatgccatgtggtggatccgcgccgcgatccaggaatacatcctgcattcctgg
tcgctggtgaagatcggtaccacggcggcacagaagaagctgttcttcaacctgcgcaag
ctgaagggccagatgcaggcgatcgaggaaggcgacctgtcgccggaacgggtgaccgcc
atcgcggaaaaactcgacgtgccggaacaggacgtcatcaacatgaaccggcggctctcc
gctccggaccactccctgaacgcaccgcttcgggtcgagggcgagggcgagtggcaggac
tggctcgtggacgagcatgaaagccaggaagagcaatatgccgaaagcgaggaactcgag
cagcggcgcaagctcctgtcggtcggcatggaagccctcaacgagcgcgagcgtcacatc
ctgaccgagcgccgactgaaggaaaacccgaccacgcttgaggatctcagccaggaatac
gatatcagccgggaacgggtccggcagattgaggtccgcgcgttcgagaagctgcagaaa
gcaatgcgcaacgccgctatcgagcagcgcctcgagaccgcgtcctga
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