Nocardia asteroides: NCTC11293_02308
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Entry
NCTC11293_02308 CDS
T06742
Symbol
nei_2
Name
(GenBank) DNA glycosylase/AP lyase Nei
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
nad
Nocardia asteroides
Pathway
nad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11293_02308 (nei_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nad03400
]
NCTC11293_02308 (nei_2)
Enzymes [BR:
nad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC11293_02308 (nei_2)
DNA repair and recombination proteins [BR:
nad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC11293_02308 (nei_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Nudix_N_2
Motif
Other DBs
NCBI-ProteinID:
VEG33992
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All DBs
Position
1:2437272..2438075
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AA seq
267 aa
AA seq
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MPEGHTLHRIARLHQERLSGGVVRVSSPQGRFTEGAARVDGQVLESAEAYGKHLLHHYAS
GLTVHVHLGLYGTFSEAELPMAAPVGQVRMRMLGAATDFGTDLRGPTACEVLLPPEVDAL
TARLGADPLRPDADHERAGARIRRSRRAIGALLMDQSIIAGVGNVYRAEVLFRHGISPFR
PGTSISAAEWDALWADLVDLMPVGVATGRMHVVRPEHDTGAPSYAQDRPRTYVYRRQGEP
CRVCGTPVAHQVMDARNLFWCPTCQPR
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgagggacacaccctccaccggatcgcccggctgcatcaggagcggctttccggt
ggggtggtgcgggtttcgagtccacaggggcgcttcaccgagggtgcggcgcgggtggac
gggcaggtgctggagtcggccgaggcctacggcaagcacctgctgcatcactacgcgtcc
gggctgacggtgcacgtgcacctcggcctgtacggcaccttcagcgaggccgagctgccg
atggcggcgccggtcggccaggtgcggatgcggatgctgggcgccgcaacggatttcggc
accgacctgcgcgggccgaccgcctgcgaggtcctgctgccacccgaggtcgacgcgctc
accgcccgcctcggcgccgacccgctgcggcccgacgccgatcacgaacgcgcgggcgcg
cggatccgccgctcccgcagggcgatcggcgcgctgctgatggatcagtcgatcatcgcc
ggcgtcggcaacgtctaccgcgcggaagtgctgttccggcacggaatctccccgttccgg
cccggcacctcgatcagcgccgccgaatgggacgcgctgtgggccgacctcgtcgacctg
atgccggtgggcgtggccaccggccgcatgcacgtcgtccgccccgaacacgacaccggc
gcaccgtcctacgcccaggaccgcccccgcacctacgtctaccgccgccagggcgaaccc
tgccgcgtctgcggcacccccgtggcccaccaggtgatggacgcccgaaaccttttctgg
tgccccacctgccagccccgctga
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