Nocardia arthritidis: F5544_27160
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Entry
F5544_27160 CDS
T06735
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nah
Nocardia arthritidis
Pathway
nah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F5544_27160 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nah03400
]
F5544_27160 (recD)
Enzymes [BR:
nah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F5544_27160 (recD)
DNA repair and recombination proteins [BR:
nah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F5544_27160 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
Helicase_RecD
AAA_22
SH3_13
T2SSE
UvrD_C
Mg_chelatase
ResIII
SLFN-g3_helicase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QIS13286
UniProt:
A0A6G9YJR9
LinkDB
All DBs
Position
complement(6089314..6091212)
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AA seq
632 aa
AA seq
DB search
MTSIQVAQRGTGLLREFNEAGVLSAADVHVALRLGRLGRESSEEVLFAAALAVRAVRSGS
VCLELHRMREIGIDADETWDAGTGVDPATLPWPQIDAVVAALRVSPLVCGGQAGPLRPLR
LVEAERTGDTGPLLYLDRYYQQEQTIRRVLTERSARHPTVDPDLVRRELDRLFDAPLGAG
PDRQRLAAALAATHWTTVVAGGPGTGKTHTIARILALLQAHQRANPKLPALRIALAAPTG
KAAARLQEAVREQAAALGLPELTAATLHRLLGWQRGRSGRFRYHEFNRLPYDVIVVDETS
MVSLTMMSSLLAALRPDTRLILVGDPDQLASVDAGAVLADLVAGPVAGAPNPLLDRIIGS
ETEAAQGHSESLSGLERTRLRGGIVRLTRGRRFGGRIADLAVAVRAGDADAALALLRAGG
DELSFSAPEDVAAVRADVVRAARDTTEAARAGAAAAALTALESHRLLCAHRQGPFGVERW
DRMAAEWAAAGGAGPESHQSQWYPGQPLLVTANDHEARIYNGDTGVIVRMPDGSLRAALQ
RGSEPYLVHPTQFPSVVTVFAMTIHRSQGSQYDTVSVVLPEPESTLLTRELLYTAITRAR
RHVRIIGAEAAIRAGIERRVLRASGLSRGNTP
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgatccaggtcgcgcagcgcggcaccggtctgctgcgcgaattcaacgaggcg
ggcgtgctttcggccgccgacgtccatgtcgcgctgcggctcggccggctcggccgggaa
tccagcgaggaggtcctgttcgcggcggccctcgcggtgcgcgcggtgcggtccggatcg
gtctgtctcgaactgcaccggatgcgcgagatcgggatcgacgccgacgaaacctgggac
gccggaacgggtgtcgatccggcgacgctgccgtggccgcagatcgatgcggttgtcgcg
gcgctgcgggtgagcccgctggtgtgcggcggccaggcgggcccgctgcggccgctgcgc
ctggtcgaggccgaacgcaccggcgacaccggccctttgctctatctggatcgctattac
cagcaggagcagacgattcggcgggtgctcaccgagcgttcggcgcggcacccgacggtc
gacccggatctggttcggcgcgaactggatcggctcttcgacgcaccgctcggcgccggt
cccgaccggcagcgcctggccgccgcgctcgccgcgacccactggaccaccgtggtggcg
ggcggtcccggcaccggaaaaacgcatacgatcgcgcggattctcgcgctgctgcaggcg
caccagcgggcgaatcccaaactgcccgcgctgcgcatcgcgctggccgcaccgacgggt
aaggcggcggcgcggctgcaggaggcggtgcgcgaacaggccgccgcgctcggcctgccc
gagctcaccgcggcgacgctgcaccggctgctcgggtggcagcgcgggcgcagcggtcgc
ttccgctaccacgaattcaaccggctcccatacgacgtcatcgtggtggacgagacctcc
atggtgtcgctgaccatgatgagcagcctgctcgccgcgctgcgccccgacacccggctg
atcctggtcggcgatccggaccagctggcctcggtcgacgcgggcgcggtgctggccgat
ctggtcgccggtcccgtggcgggcgcgccgaatccgctgctcgaccgcattatcggatcg
gaaaccgaagcggcgcaaggtcattcggagtcgctgagcgggctggagcgaaccaggctg
cgcggcggcatcgtccggctgacccgcggccgccgcttcggcggccgcatcgccgacctg
gccgtcgcggtccgcgcgggcgacgccgatgccgcgctcgcgctgctgcgcgccggcggc
gacgaattgtccttcagcgcaccggaagacgtcgccgcggtgcgcgccgacgtggtgcgc
gcggcccgcgacacaaccgaggcggcgcgcgccggtgccgctgcggcggcgctgaccgcg
ctcgaatcgcaccgcctgctgtgcgcgcatcgccaggggccgttcggcgtcgagcgctgg
gaccggatggccgcggaatgggccgccgcgggcggcgcaggccccgaatcccatcagtcg
cagtggtatcccgggcagccgttgctggtcaccgccaacgatcacgaggcgcgcatctac
aacggcgacaccggcgtcatcgtccggatgcccgacggttcgctgcgcgcggccctgcag
cgcggcagcgaaccgtatctggtgcaccccacccaattcccctcggtggtaacggttttc
gccatgaccatccaccgcagccagggcagtcagtacgacacggtctcggtggtgctgccc
gaaccggaatccacgctgctcaccagggaactgctgtatacggccatcaccagggcgcgg
cgccacgtgcggatcatcggcgccgaggcagccatccgcgccggaatcgaacgccgggtg
ctgcgcgccagcggactttcccgcggaaacaccccgtga
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