Nocardiopsis akebiae: KGD83_00860
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Entry
KGD83_00860 CDS
T08903
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
nake
Nocardiopsis akebiae
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nake03021
]
KGD83_00860 (sigM)
Transcription machinery [BR:
nake03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KGD83_00860 (sigM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
DUF134
HTH_17
DUF2740
Motif
Other DBs
NCBI-ProteinID:
QUX29187
LinkDB
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Position
complement(188210..188836)
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AA seq
208 aa
AA seq
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MDALQELPDRELLTRHAQGDDQAFAVLVRRHRERLWAVAVRMMGDREEASDALQDAFLSA
FRAADRFRGEAQVSTWLHRIVVNACHDRLRRRKVRPATPTEDETLDVMSNERLGRSGGGP
DHASQTETRLDVNAALDLLPLDQRMALTLVDMLGYRVEEAAQILDVASGTVKSRCARGRA
RLLPSLAHLRNPRQAGDVTTGRGGANPS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgctccaggagcttcctgaccgggagctgttgacgaggcacgctcagggcgac
gaccaggccttcgcggtcctggtgcgtcggcaccgcgagcgcctttgggctgtcgccgtg
cgcatgatgggcgaccgcgaggaggcctccgacgcgctccaggacgcgttcctgtccgcg
ttccgcgcagccgaccgcttccgcggcgaggcgcaggtgagcacgtggctgcaccggatc
gtggtgaacgcctgccacgaccggctgcggcgccgcaaggtgcgcccggccactccgacc
gaggacgagaccctggacgtgatgtccaacgagaggctcggccgctcgggaggggggccg
gaccacgcctcgcagaccgagacgcgcctggacgtcaacgccgcgctggacctgctcccg
ctggaccagcgcatggcgctgaccctcgtggacatgctcggctaccgggtggaggaggcc
gcgcagatcctcgacgtggcgtcggggaccgtcaagagcaggtgtgcgcgaggtcgcgcc
agacttctcccgtcgctggcccatctgaggaaccctcgacaagccggagacgtcacaact
gggagaggaggtgccaacccatcgtga
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