Candidatus Nitrospira allomarina: PP769_11490
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Entry
PP769_11490 CDS
T09427
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
nall
Candidatus Nitrospira allomarina
Pathway
nall03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PP769_11490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nall03400
]
PP769_11490
DNA repair and recombination proteins [BR:
nall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PP769_11490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WNM56601
UniProt:
A0AA96G841
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All DBs
Position
2586958..2587818
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AA seq
286 aa
AA seq
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MTRPIWKGHITFGLVTIPVVVHSAEKQFDLHFRLLDSRNQARVRYERVNEETGEEVPWQD
IVKGFEYEEGRYVLLNDADFEKVAIEVNKSVEIEAFVNGKDIGYEYFEKPYYLVPDKKGD
KVYVLLREVLRRSGKVGIAKVVIRTRQYLAALIPQGHVLMLELLRFHQEIRNMKELDVPE
ASVKSYKISEKELTLAQQLVESMSTKWEPQRYHDDYRDALLKWIEKKSKSARSRTSVPPA
AKEEKIGSGKVVDIMSLLKKSVQKAQPSGRGKKRKSASPRKSRKAS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggccaatttggaaagggcacatcacctttggtcttgtcacaattcctgttgtc
gttcattcagcggaaaaacaatttgacttgcatttccggttgttggatagccggaatcag
gccagagtccggtatgaacgtgtgaacgaggagacgggtgaagaggtcccatggcaggac
attgtaaaagggtttgaatatgaagagggtcggtatgttctgttaaatgatgccgatttt
gaaaaagttgccattgaagtgaataaatcagttgaaatcgaagcttttgtcaacggaaag
gatatcggctacgagtattttgaaaagccctattatcttgttcccgataaaaagggtgat
aaagtatacgtactgttacgggaagtgcttcgtcggagtggcaaagtcgggattgccaaa
gtcgttatccgcacacgccagtatttagccgctctgattcctcaaggacatgttctgatg
ctggagcttctgcgatttcatcaagaaatccgcaatatgaaagaattggatgtgcctgaa
gcaagtgtgaaatcttacaaaatttcggaaaaggaattgactttggcccaacagttagtg
gaatccatgagcaccaagtgggaaccccagcgttaccatgatgattaccgcgatgctttg
ttgaaatggattgaaaagaaatcgaaaagtgcccgatcacgaacatccgtcccccctgcc
gcgaaagaagagaaaatcggttcaggaaaagtcgttgatatcatgtccttgttaaagaaa
agcgttcaaaaggcccaaccctccggccgaggcaaaaaacgtaaatccgcctcccctaga
aaatcccgtaaggccagttaa
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