KEGG   Candidatus Nitrospira allomarina: PP769_11490
Entry
PP769_11490       CDS       T09427                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
nall  Candidatus Nitrospira allomarina
Pathway
nall03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:nall00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PP769_11490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nall03400]
    PP769_11490
DNA repair and recombination proteins [BR:nall03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     PP769_11490
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: WNM56601
UniProt: A0AA96G841
LinkDB
Position
2586958..2587818
AA seq 286 aa
MTRPIWKGHITFGLVTIPVVVHSAEKQFDLHFRLLDSRNQARVRYERVNEETGEEVPWQD
IVKGFEYEEGRYVLLNDADFEKVAIEVNKSVEIEAFVNGKDIGYEYFEKPYYLVPDKKGD
KVYVLLREVLRRSGKVGIAKVVIRTRQYLAALIPQGHVLMLELLRFHQEIRNMKELDVPE
ASVKSYKISEKELTLAQQLVESMSTKWEPQRYHDDYRDALLKWIEKKSKSARSRTSVPPA
AKEEKIGSGKVVDIMSLLKKSVQKAQPSGRGKKRKSASPRKSRKAS
NT seq 861 nt   +upstreamnt  +downstreamnt
atgaccaggccaatttggaaagggcacatcacctttggtcttgtcacaattcctgttgtc
gttcattcagcggaaaaacaatttgacttgcatttccggttgttggatagccggaatcag
gccagagtccggtatgaacgtgtgaacgaggagacgggtgaagaggtcccatggcaggac
attgtaaaagggtttgaatatgaagagggtcggtatgttctgttaaatgatgccgatttt
gaaaaagttgccattgaagtgaataaatcagttgaaatcgaagcttttgtcaacggaaag
gatatcggctacgagtattttgaaaagccctattatcttgttcccgataaaaagggtgat
aaagtatacgtactgttacgggaagtgcttcgtcggagtggcaaagtcgggattgccaaa
gtcgttatccgcacacgccagtatttagccgctctgattcctcaaggacatgttctgatg
ctggagcttctgcgatttcatcaagaaatccgcaatatgaaagaattggatgtgcctgaa
gcaagtgtgaaatcttacaaaatttcggaaaaggaattgactttggcccaacagttagtg
gaatccatgagcaccaagtgggaaccccagcgttaccatgatgattaccgcgatgctttg
ttgaaatggattgaaaagaaatcgaaaagtgcccgatcacgaacatccgtcccccctgcc
gcgaaagaagagaaaatcggttcaggaaaagtcgttgatatcatgtccttgttaaagaaa
agcgttcaaaaggcccaaccctccggccgaggcaaaaaacgtaaatccgcctcccctaga
aaatcccgtaaggccagttaa

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