Nitrospirillum amazonense: Y958_12955
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Entry
Y958_12955 CDS
T04935
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nao
Nitrospirillum amazonense
Pathway
nao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Y958_12955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nao03400
]
Y958_12955
Enzymes [BR:
nao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Y958_12955
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Y958_12955
DNA repair and recombination proteins [BR:
nao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Y958_12955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ASG21613
UniProt:
A0A248JSA6
LinkDB
All DBs
Position
1:complement(2803766..2804623)
Genome browser
AA seq
285 aa
AA seq
DB search
MPELPEVETVARGLALKMEGRTLVRVAQHRPNLRTPFPAGFAQRLTGRRVAGIGRRAKYV
LVRLDPVSGSGDDTLLIHLGMSGSMVVSRGPAGAPGAHDHVVMETDDGAVVTFNDPRRFG
LMDLIADGQVDSHPLLAKLGPEPLGNEFDADTLSARLAGKMTPIKAALLDQRVVAGLGNI
YVCEALFRSGISPERSAASVAGKDAQRLVPAIRDVLTEAIAAGGSSLRDYVQSDGELGYF
QHSFAVYGREGEACPGCDCDVARTGGVRRLVQAGRSSFFCARRQR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcccgaggtcgaaaccgtggcccggggcctggccctgaagatggagggc
cgcacgctggtgcgcgtggcccagcaccgccccaacctgcgcacgccctttccggccggc
ttcgcccagcgcctgacgggccgccgcgtggccggcatcggccgccgggccaagtatgtg
ctggtgcgtctcgaccctgtttccggttcgggggacgataccctactcatccacctgggc
atgtcgggcagcatggtggtcagccgggggccggcgggcgcgcccggggcgcacgaccat
gtggtcatggaaacggacgacggcgccgtcgtcaccttcaacgacccccgccgcttcggc
ctcatggacctgatcgcggacgggcaggtggacagccaccccctgctggccaagctgggg
ccggagcccctaggcaatgaattcgacgcggacacgctgtccgcccgcctggccggcaag
atgacgcccatcaaggcggcgctgctggaccagcgcgtggtggccggcctgggcaacatc
tatgtctgcgaggcgctgttccgttccggcatcagcccggaacggtcggccgccagcgtg
gcgggcaaggacgctcagcggctggtgccggccatccgcgacgtgctgaccgaggccatc
gcggcgggtggatcctccctgcgcgactacgtccagtcggatggcgagttgggctacttc
cagcactccttcgccgtttatggacgggagggcgaggcctgccccggttgcgactgcgac
gtggcccgcacgggcggcgtgcggcggctggtgcaggccggccggtccagcttcttctgc
gcacggcggcagcgctga
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integrated database retrieval system
