Novosphingobium aromaticivorans: Saro_1116
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Entry
Saro_1116 CDS
T00322
Name
(GenBank) HhH-GPD
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nar
Novosphingobium aromaticivorans
Pathway
nar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Saro_1116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nar03400
]
Saro_1116
Enzymes [BR:
nar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Saro_1116
DNA repair and recombination proteins [BR:
nar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Saro_1116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ABD25561
UniProt:
Q2G9B2
LinkDB
All DBs
Position
1162772..1163389
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AA seq
205 aa
AA seq
DB search
MGLSAEAIREGLDHIAARSPALADAIERVGYPEPRIRPTGYRTLLRTIVGQQVSVSAAAS
VWNKLEALLGEDLPPHDLLAADFDALRACGLSRQKQGYARSLCELVVSGELDFDSLPQDD
EEAIAELVKIKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQVGLGRLLGLPERPSEKDTRV
LAEQWRPHRGAAAIFTWHCYNNPAL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgggtcttagcgcagaggcaatccgcgaaggactggaccatattgccgcccggtctccg
gcgctggccgatgcgatcgaacgcgtcggataccccgagccgcgcataaggccgaccggc
tatcgcacgctgttgcgcacgattgtcgggcagcaggtcagcgtgtcggcggcggcatcg
gtgtggaacaagctggaggccctgctgggcgaagacctgcccccgcatgacctgctcgcg
gccgacttcgacgcgttgcgcgcctgcggcctgtcacgccagaagcagggctacgcgcgc
agtctttgcgaactggtggtatccggcgaactcgatttcgattcgctgccgcaggacgac
gaggaggcgattgccgaactcgtgaagatcaaggggatcgggcgctggtcggcggaaatc
tacctcctgttcgcggaggggcggcctgatatctggccggcgggcgaccttgcagtccag
gtggggctggggcgattgctcggactgccggaacgtccgagcgagaaggatacgcgcgtc
ctggccgaacagtggcggccccatcgcggcgcggcggcgatcttcacctggcattgctat
aacaatccggcgctgtag
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