Nicotiana attenuata (coyote tobacco): 109227476
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Entry
109227476 CDS
T05870
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109227476
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nau01009
]
109227476
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109227476
03036 Chromosome and associated proteins [BR:
nau03036
]
109227476
Protein phosphatases and associated proteins [BR:
nau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
109227476
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
109227476
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
109227476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
Htt_N-HEAT_1
HEAT_EZ
Adaptin_N
CLASP_N
SCD
Cnd1
Motif
Other DBs
NCBI-GeneID:
109227476
NCBI-ProteinID:
XP_019248199
UniProt:
A0A1J6IQL8
LinkDB
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Position
6:93257736..93266540
Genome browser
AA seq
581 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHASVLLPPLEGLCSVEETCVREKAVESLCRIGSQMRES
DLVESFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEPLKNELRTIYSQLCQDDMPMVR
RAAATNLGKFAATIEQPHLKTDIMSMFETLTQDDQDSVRLLAVEDCAALGKLLEPKDCVA
QILPVIVNFAQDKSWRVRYMVANQLYELCEAVGPEATRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPILGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPTWAMEHIIPQV
LDMINDPHYLYRMTILHAISLLAPVMGSEITCSKLLPVIITASKDRVPNIKFNVAKVLQS
LIPIVEQSVVETTIRPCLVELSEDPDVDVRFFANQALQATK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggttgatgagccattgtatcccattgcggttttgattgatgagttgaagaat
gaagacatccagcttagattgaattcaatccggcgcttgtctaccattgctcgtgctctt
ggtgaggagagaactcggaaagagttgattccatttctaagcgagaacaacgatgacgat
gatgaagttcttcttgcaatggccgaagagttgggggtgtttattccatacgttggaggg
gttgaacatgcgagtgtattgcttccacccttggaaggtctttgtagtgttgaagagact
tgtgttagggaaaaggcagttgagtcattatgcagaattgggtctcaaatgagggaatca
gacttggtggaatcatttattccacttgtgaagagactggctgctggagagtggtttact
gctcgagtttcgtcctgtggattgtttcacattgcctatcctagtgctccagagccatta
aagaacgaactaaggaccatctatagccaactttgccaagatgatatgcctatggtgagg
agagcagctgctacaaatcttggaaagtttgctgctactattgaacaaccccatttgaag
actgacatcatgtcaatgtttgaaaccctgacccaggatgatcaagattctgtccgttta
ttggctgttgaagattgtgcagctttggggaagctgttggagcccaaagattgtgttgca
caaattctgcccgtcatagttaattttgctcaggataagtcttggcgtgttcgttacatg
gttgcaaatcaactttatgaactttgtgaggcagttggaccagaggctaccaggacggac
ttggtccctgcctatgttcggctacttcgtgacaatgaggctgaagtgcgtatagctgct
gctggcaaggtgactaagttctgccgtattttgagccctgagcttgctatccagcatatc
cttccttgcgtaaaggagctatcatcagattcatcccaacatgtccgttctgctttggct
tcagttatcatgggaatggcgcctattctcggaaaggatgcaactatagagcagcttctc
ccaattttcctctctcttctgaaggatgagtttcctgatgttcgtttgaatattatcagt
aagcttgatcaagtaaaccaggtgattggaattgatttgctctcccaatccctgctgcca
gctattgttgaacttgcagaggatagacactggagggttcggcttgcaataattgagtac
atacctctattggcaagtcagctgggggtcggcttttttgatgacaagctcggtgctctg
tgcatgcaatggctaaaagacaaggtttactctattagagatgcagcagcaaacaatgtt
aagcgccttgctgaggagtttggtccaacatgggcaatggagcatataattccacaggtg
ttggatatgattaatgacccacattatctttaccggatgacaatccttcatgcaatttct
cttcttgcccctgtaatgggctcagaaattacttgttccaaacttctgccagttattatt
actgcttcaaaagacagggtaccgaatatcaagttcaatgtggctaaggtgttgcagtct
cttattccaatagttgaacaatctgtcgtggagacaacaattcgaccatgtttggttgaa
ctcagtgaggatccagatgttgatgttcggtttttcgccaaccaagccctacaagcaacc
aagtga
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