Nicotiana attenuata (coyote tobacco): 109228980
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Entry
109228980 CDS
T05870
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial-like
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03030
DNA replication
nau03410
Base excision repair
nau03420
Nucleotide excision repair
nau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109228980
03410 Base excision repair
109228980
03420 Nucleotide excision repair
109228980
03440 Homologous recombination
109228980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nau03032
]
109228980
03400 DNA repair and recombination proteins [BR:
nau03400
]
109228980
Enzymes [BR:
nau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109228980
DNA replication proteins [BR:
nau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
109228980
DNA repair and recombination proteins [BR:
nau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
109228980
NER (nucleotide excision repair)
GGR (global genome repair) factors
109228980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
109228980
NCBI-ProteinID:
XP_019249804
UniProt:
A0A1J6I7Q7
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All DBs
Position
7:complement(42686543..42695418)
Genome browser
AA seq
1152 aa
AA seq
DB search
MAFLGFSVQSSPFKPTSSLWFSPHSFSSSRSFWASSGKALHRREDCKTQSAENASSSLAV
LGDSVKQISSHERKLFSSGLQHKIEEDSTYGWIAEINALKASKAKSSYNSYKKISAANCN
VSASTNRKVKDEFFDVPTEVNTRMMRERITSSYSATTCISGGNLSSKSKPPYNSAGGEKK
VVGNWREYENHLPQLSVGLNHSRVNGARSVNKVDGSNVSHYKPLSKGSHLNGQLSSKIME
AKLEKVNKLREGHASDQLRHSVNGTKTKVVTVKAKGVIQERAMNKMEKNVIQAVTADVMN
GAEANAKGVILERATNKMEKNAIQSMETDVINGTKTRIVSDEGTGVSQVSLRERLGAMYD
KVHIVDNLSAAKEVVRKLTSQYRHLVHACDTEVAKIDVKQQTPVDHGEIICFSIYSGPEA
DFGDGKSCIWVDVLDGGGKNILVEFAPFFQDPSIRKVWHNYSFDNHVIENYGFNVSGFHA
DTMHMARLWDSSRRTSGGYSLEALTGDSTVMRDARPVHAERLFHGEGLFGKISMKTIFGR
KKLKKDGTEGKVTVIPSVEELQKTERELWICYSALDSISTLMLYESLKNKLSKRIWTFDG
VRKGSMYEFYEKYWRPFGELLVQMETEGVLVDRAYLAEIEKVAKAEQQVAANRFRNWAAK
YCPDAKYMNVGSDTQLRQLFFGGIQNRKNSDESLPYEKEFKVPNVDKVIEEGKKAPTKFR
KIRLHRICDLIDTEMYTASGWPSVSGDALKALSGKVSADFDILDEADDNAEEDPETSIDE
ALATNNEVPSQEPEVSIYGSAYNAFGGGQKGIEACHAIAALCEMCSIDSLISNFILPLQG
QDVSGENGRIHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFVAAQGNSLIVADY
GQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMYTHIREAVENGEVLLEWHPQPGEEK
PPVPLLKDAFGSERRKAKMLNFSIAYGKTTIGLARDWKVSVKEAKETVDRWYSDRKEVSD
WQEQRKFEAREFRRVHTLLGRARWFPSVKNATGSVKGHIERAAINTPVQGSAADVAMCAM
LEISKNARLEELGWKLLLQVHDEVILEGPEESEKEAMAIVVDCMSKPFGGKNILRVDLSV
DSKCAKNWYSAK
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggcattcttggggttctcagttcagtcttcccctttcaaacccacctcttctctttgg
ttttctcctcattccttctcctcttctcgttccttttgggcttcctctggtaaagccctc
cacaggcgggaagattgcaaaactcagagtgcagaaaatgcgtcgtccagcttagcagtg
cttggcgattccgttaaacaaatatcaagtcatgaaaggaagttattttctagtggacta
caacataaaattgaggaagacagtacttatggatggatcgctgaaattaatgctcttaaa
gcttctaaagctaaaagctcttataatagttacaaaaagatttcagcagcaaattgtaat
gttagtgcctctacaaatcggaaggtcaaagatgaattttttgatgttccaactgaagtc
aatacgagaatgatgcgtgaacgcatcacctctagctattctgccacaacctgtatttca
ggaggcaacttatcttcaaaaagcaaaccaccttataactctgctggaggagaaaagaag
gtagttggaaactggagagagtatgaaaaccatttgccacaattatctgtaggtcttaac
cattcaagagtcaatggagctaggtcagtaaataaggttgatggttctaatgtatctcat
tacaaacccttatcaaaaggttcccatcttaatgggcaattatcaagcaaaattatggaa
gcaaagttggagaaggtaaataaactaagggagggtcatgcatctgatcaactaagacac
agtgtgaatgggaccaagaccaaggtagttactgtcaaagcaaaaggtgttatccaggag
cgtgctatgaataaaatggagaagaatgtaattcaagccgtgacagctgatgtcatgaat
ggagctgaggccaatgcaaaaggggttatcctggagcgtgctactaataaaatggaaaag
aatgcaattcaatccatggaaactgatgtcataaatggaaccaagactaggattgttagt
gatgaaggaacaggtgtaagtcaggtttccctccgtgagaggctgggtgcaatgtatgac
aaagttcatatagttgacaatttatcagcagctaaggaagttgtcagaaagcttacaagt
cagtacaggcatctcgtccatgcgtgtgatacagaggtagcaaagattgatgttaagcag
caaacacctgttgatcatggagaaattatatgcttcagtatttattctggaccagaggct
gattttggtgatgggaaatcttgtatctgggtagatgttcttgatggaggtggcaagaac
atcttagttgaatttgctccatttttccaagacccatccattagaaaggtctggcacaat
tatagctttgacaaccatgtcatcgagaactatgggtttaatgtatcgggctttcacgct
gacacaatgcacatggcacgactttgggattcctctaggcgaacttcaggtggttattca
ctagaggcactaacaggtgattccactgtcatgcgtgatgctagacctgtccatgctgaa
aggctgttccatggtgaaggtctgtttggtaaaatatctatgaaaacgatctttggtcgg
aaaaagctgaagaaagacggaactgagggtaaagttactgtcattccttctgttgaggag
ttgcaaaaaactgaaagagaattatggatttgttattctgcattagactccataagcaca
ttgatgctttacgagagtttaaagaataaactgtctaaacggatctggacattcgatgga
gttcgtaaaggatcgatgtatgagttttatgagaaatactggcgtccatttggtgagctt
ctagttcaaatggaaactgagggtgtgctggttgaccgtgcctatcttgctgagattgag
aaagtggctaaagctgagcagcaggttgctgctaatagatttcgtaactgggcagctaag
tactgtcctgatgcgaagtacatgaatgttggaagtgatacacagttgcgtcagctgttt
tttggtggcatccagaatagaaagaattctgatgagagtctaccatatgagaaagaattc
aaagttccaaatgtcgataaagtaattgaagaaggaaagaaggctcccaccaaatttcgt
aaaatccgactacatagaatttgtgatcttatcgacactgagatgtacactgctagtggc
tggccttctgttagtggggatgctttgaaggctctctctggcaaagtttctgcggacttt
gatattcttgatgaagcggatgacaatgctgaggaagatcctgaaacaagcattgatgaa
gctttagctacaaataatgaagttcccagtcaagaaccagaagtttctatttatggatca
gcgtacaacgcctttggaggtgggcagaaaggaattgaggcctgccatgccattgcagca
ttatgtgaaatgtgctccatagactctttaatatccaactttatactcccattgcaaggc
caagatgtatcgggtgagaatggacgaattcattgttccctgaatattaacactgaaacc
gggcgtctgtctgcgaggagaccaaatttacagaaccagcctgctctggagaaagatagg
tacaaaattcgtcaagcttttgtagctgcacaagggaattccttgattgtggccgactat
gggcagttggaacttaggattcttgcacatcttgccaactgtaagagcatgttggatgct
ttcaaagctggtggagacttccattcaaggactgctatgaacatgtatactcacatccgt
gaagccgttgaaaatggtgaggtacttcttgagtggcatcctcaaccaggtgaagaaaaa
cctccagttcctcttctaaaggatgcttttggctctgaaagaaggaaggcaaagatgctc
aatttttcaattgcgtacgggaaaactacaattggacttgcccgcgactggaaggtatca
gtaaaggaagctaaggaaacagttgatcggtggtatagtgatagaaaagaagtgtcagat
tggcaggaacaacgcaaatttgaagcacgcgagttcagacgtgttcacacgcttctggga
cgggcacgctggttcccatcagtaaaaaatgcaactggatctgtaaaaggtcacatagaa
cgagctgctataaatactccagtgcagggaagtgctgcagatgtcgctatgtgcgccatg
ttagagatatcaaagaatgcacggctagaggagcttggatggaaattgcttttacaggtt
catgatgaagttattttggaagggccggaagagtctgaaaaagaagccatggcaatagtg
gttgactgcatgtccaagccttttggtggaaagaatattctcagagttgacctatctgtt
gattctaaatgtgccaaaaactggtattctgccaagtag
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