Natronorubrum bangense: DV706_19790
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Entry
DV706_19790 CDS
T05942
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nbg
Natronorubrum bangense
Pathway
nbg03022
Basal transcription factors
nbg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nbg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DV706_19790
09124 Replication and repair
03420 Nucleotide excision repair
DV706_19790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nbg03021
]
DV706_19790
03400 DNA repair and recombination proteins [BR:
nbg03400
]
DV706_19790
Enzymes [BR:
nbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DV706_19790
Transcription machinery [BR:
nbg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DV706_19790
DNA repair and recombination proteins [BR:
nbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DV706_19790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_30
TrmB
AAA_22
AAA_25
AAA_33
AAA
Motif
Other DBs
NCBI-ProteinID:
QCC56785
UniProt:
A0A4D6HTJ4
LinkDB
All DBs
Position
unnamed2:55585..57501
Genome browser
AA seq
638 aa
AA seq
DB search
MTDERSPDASGDDQQPGVTANGETTSDAEGKQQLTLASFHDACQQAGRPVLTAASVAQTL
EIPHEAASEALEALADHGDVERLSVETDPVVWYPSELEDLTDRERVVVFPKRREIIVDRP
DQFTRAQLSQFAHLADGNGDDGYRYVVRPEDIWQAPHDSFTALTRTMRQALGQRSDALEE
WVESQWDRAHQFRLATHEDGYTVLEAKTPEVMGNVARQKLDEEHVHAPISETEDWVREGA
EAAIKRILYEAGYPVQDHRDLEAGEALSIELDVRLRDYQQTWVNRFAEAGEGVFVGPPGS
GKTVAAMGAMAHVGGETLVLVPSRDLARQWAESIAEHTSLDPHQIGQYHGGRKEVRPVTI
ATYQIAGMDRHRSLFDDREWGLVVFDECQHVPSDVYRRSTHLQSRHRLGLSASPIREDDR
QTEIFTLVGPPIGTDWEALFEAGFVAEPELEIRYVPWGDDEQRNAYVSADGREKYRIAAK
NRGKIDDVRYLLSAHPDSKAIVFVDYLEQGRDLAAALDVPFLSGETPHHERRRLLEEFRR
NERDLLVISRVGDEGIDLPTADLAIIASGLGGSRRQGTQRAGRTMRPAGGALVYVLATYG
TREEDFARKQLQHLGRKGMTIREQTVERSRETDSSDDE
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgaacgttccccggatgcatctggtgacgatcaacagcccggcgtgacagcc
aacggcgagacgacaagtgatgctgagggcaaacagcaactgacgctcgcatcgttccac
gacgcgtgccagcaggcgggacggcccgttctcaccgcggcatccgttgcgcaaacgctc
gagataccccacgaagcggccagcgaagcgcttgaggcgctcgcagaccacggcgacgtc
gagcgactctccgtcgagacggatcccgttgtctggtacccgagcgaactcgaggatctg
accgaccgagaacgcgtagtcgtctttccgaagcgacgtgaaattattgtcgaccggcca
gatcagttcacgcgggcacagctctcccagttcgcccaccttgcagacggtaacggggac
gacggctaccgatacgtcgtccgtccggaggacatctggcaggcccctcacgacagcttt
acagcactcacccggacgatgcgacaggcgctgggccagcgatccgacgcgctcgaggag
tgggtcgaaagccagtgggaccgcgctcatcagttccggctggcgacccacgaagacggc
tacacggtgctcgaggccaagacacccgaagtgatgggcaacgtcgcccggcagaaactc
gacgaggaacacgtccacgcgccgatctctgagaccgaagactgggtgcgtgagggcgca
gaagcggcgatcaagcgcatcctctacgaagcgggctatccggtccaagaccaccgggat
ctcgaggccggggaggcgctctcgatcgaactcgacgtacgacttcgggactaccagcaa
acgtgggtcaaccgattcgccgaggctggtgagggtgtctttgtcgggccgccgggcagt
gggaagacggtcgcggcgatgggtgcgatggcccacgtcggcggggaaacgctcgtcctg
gtcccgagtcgggatctcgcgcgccagtgggccgagtcgattgcagagcacacctccctc
gatccccaccagatcgggcagtaccacggtggccgaaaggaggtccgcccggtcacgatc
gcgacctaccagatcgccgggatggatcgccatcgatcgctgttcgacgaccgcgagtgg
ggactggtcgtcttcgacgagtgccagcacgtcccctcggacgtgtatcggcggagcacg
cacctgcagtctcgtcatcgactcggcctctctgccagcccgatccgggaggacgaccgc
cagaccgagatcttcacgctcgtcggcccaccgatcggcaccgactgggaggcgctgttc
gaggccggcttcgtcgccgaaccggaactcgagatccgctacgttccgtggggtgacgac
gagcaacgaaacgcctacgtctcagccgatggtcgcgaaaagtaccgcatcgccgcgaaa
aaccgcggaaagatcgacgacgtccgatatctgctctcggcccaccccgactcgaaagcg
atcgtcttcgtcgactatctcgagcagggccgcgacctcgcagccgcactcgacgtgccg
tttcttagcggcgagacgccccaccacgagcgacgccggctgctcgaggagttccgacga
aacgagcgcgatctgctagtcatctcccgcgtcggcgacgagggaatcgacctgccgacg
gccgacctcgcgattatcgcctcaggactggggggctcgcgacggcagggaacccagcga
gccggccgaacgatgcggccagccggtggcgcgctcgtgtacgtgctcgcgacctacggc
acacgcgaggaggactttgcccgaaaacagctccagcatctcggtcgcaaggggatgacg
atccgcgagcagacggtcgaacgtagtcgcgaaaccgacagcagcgacgacgagtaa
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