Sciurus carolinensis (gray squirrel): 124962422
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Entry
124962422 CDS
T08117
Name
(RefSeq) isopentenyl-diphosphate Delta-isomerase 1 isoform X1
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00900
Terpenoid backbone biosynthesis
ncar01100
Metabolic pathways
Module
ncar_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
ncar_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
124962422
Enzymes [BR:
ncar01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
124962422
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
DUF4188
Motif
Other DBs
NCBI-GeneID:
124962422
NCBI-ProteinID:
XP_047377706
EnsemblRapid:
ENSSCRG00010014560
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All DBs
Position
12:complement(7635078..7640731)
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AA seq
281 aa
AA seq
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MWRGRALVQVVGRAARGWDQGALRAALRAQKGSAPRSVRFSGLSVLGQIRHFVTMPEINT
SHLDEKQVQLLAEMCILIDENDNKIGADTKKNCHLNENIEKGLLHRAFSVFLFNTENKLL
IQQRSDAKITFPGCFTNTCCSHPLSNPGELEENDAIGVRRAAQRRLKAELGIPLEEVPPE
EMNYLTRIHYKAQSDGIWGEHEIDYILFVQKNVTLNPDPNEIKSYFYASKEELKELMKKA
ASGEIKVTPWFQIIVDTFLFKWWDNLNHLNQFVDHEKIHRL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgggagggcgctggtgcaagtggttgggcgcgcagcgcgggggtgggatcag
ggggcgttacgtgctgctctccgcgctcaaaaggggagcgctccccggtctgttcgcttt
tcaggcctgagtgttttgggacagatcagacattttgtaacaatgcctgaaataaatacc
agtcatctagatgagaaacaggtccagctccttgcggagatgtgtattcttattgatgaa
aatgacaataaaattggggccgacaccaagaagaactgccacttgaatgaaaacattgag
aaaggattattacatcgagcttttagtgtcttcttatttaacactgaaaataagcttctg
atacagcagagatcagatgctaaaattacctttccaggttgttttaccaacacttgttgc
agtcatccattaagtaatccaggcgagcttgaagaaaacgatgccattggtgtaaggcga
gcagcgcagaggcgtttaaaagccgaattaggaatccctttagaagaggttcctccagaa
gaaatgaattatctaacacgaattcactataaggcacaatctgatggtatctggggtgaa
catgaaattgattatattttgtttgtgcagaagaatgtaactttgaatccagatcccaat
gaaattaaaagctatttttatgcgtccaaggaagaactaaaagaacttatgaaaaaagca
gccagcggtgaaattaaggttactccatggtttcaaattattgtggacacttttctcttt
aaatggtgggataacctgaatcatttgaatcagttcgttgaccatgagaaaatacataga
ctgtga
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