Sciurus carolinensis (gray squirrel): 124972239
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Entry
124972239 CDS
T08117
Name
(RefSeq) properdin-like
KO
K15412
complement factor properdin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124972239
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Gene cluster
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Motif
Pfam:
TSP_1
TSR
TSP1_spondin
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
124972239
NCBI-ProteinID:
XP_047392463
EnsemblRapid:
ENSSCRG00010016844
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Position
X:complement(39585985..39592030)
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AA seq
465 aa
AA seq
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MTIRAQAPQSLLLLLFTLRTTGSDPVLCFSEYEETSGRCKGLLGGGVSVEDCCLNAAYAF
QERDSGLCQACRLPRWSPWSSWAPCSVTCSEGSQLRHRRCMGRGGHCPEKVDPGTLEWQL
QACEDQPCCPEMGGWSEWTPWGPCSVTCSKGIRTRQRVCDRPAPKCGGRCPGEAQQSEAC
DTQKVCPIHGAWAAWGPWSPCSGSCHGGPHMPTETRSRTCSAPEPSKQPPGKPCQGPAYE
QRGCTGLPPCPVAGGWGPWGPVSPCSVTCGLGQTLEQRTCDKPAPQYGGPICAGDATRTH
ICNTAIPCPVDGEWAAWGKWSTCARLNLKSISCEEIPGQQTRTRICVGRKFNGQRCAGQY
QDIRHCYNIQNCILKGQWSEWSTWGLCTPPCGPNPTRIRQRNCSALLPNFSPTVSTVEGQ
GEKNMTFWGNPRPMCEELQGQKLVVKEQRPCLHVPACIDPQEQKP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgactatccgagcgcaggcccctcagtcactgctgctgctactgttcaccctgcgaacc
acaggctcagaccctgtgctctgcttcagcgaatatgaagaaacctctggcaggtgcaag
ggtctcctagggggaggcgtcagtgtggaggactgctgtctcaatgctgcctatgccttc
caggagcgtgacagtgggctctgtcaggcatgcaggttgccacgatggtcaccatggtcc
tcatgggccccctgctcagtgacatgctctgaaggctcccagctgcgacaccggcgctgc
atgggcaggggtgggcactgccctgaaaaggtggatcctgggacccttgagtggcagcta
caggcttgtgaagaccagccctgctgtcctgagatgggtggctggtctgaatggacaccc
tgggggccttgctctgtcacctgctccaaaggaatccggactcgccagcgagtatgtgat
cgccctgcccccaagtgtgggggccgctgcccaggagaggcacagcagtcagaggcctgt
gacacccagaaggtctgccctatacatggggcctgggctgcctggggcccttggagcccc
tgctcaggctcctgccatggtggaccccacatgcctacggagacacgaagccgcacatgc
tctgcacctgagccctccaagcagcctcctgggaagccctgccaaggaccagcctatgag
cagcggggctgcactggcctgccaccctgtccagtggccgggggctgggggccatggggc
cctgtgagcccttgctctgtgacctgtggcctaggccagaccctggaacaaaggacatgt
gataaacctgcaccccagtatgggggtcccatctgtgctggtgatgccactcggacccac
atctgcaacacagccatcccctgccctgtggatggagagtgggcagcctgggggaagtgg
agcacctgcgcccgcctcaacctgaagtctatcagctgtgaggaaatccccggccagcag
acacgcacgaggatttgcgtgggccgcaagtttaatggacagcgatgtgctgggcaatat
caggatatccgacattgctacaacatccagaattgcatcttgaaaggccagtggtcagag
tggagtacctgggggttgtgtacacccccatgtggacccaaccccacccgcatccgccag
cgcaactgctcagccttgctccccaacttctcgcccaccgtttccacggtcgaaggtcaa
ggtgagaagaacatgaccttctgggggaatccacggccaatgtgcgaggagcttcaggga
cagaagctggtggtgaaagaacaacggccatgtctacatgtgcctgcctgcatagaccct
caggaacagaaaccctag
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